DRSC/TRiP Functional Genomics Resources

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Protein Alignment Uba3 and Uba7

DIOPT Version :9

Sequence 1:NP_610913.1 Gene:Uba3 / 36539 FlyBaseID:FBgn0263697 Length:450 Species:Drosophila melanogaster
Sequence 2:NP_076227.1 Gene:Uba7 / 74153 MGIID:1349462 Length:977 Species:Mus musculus


Alignment Length:578 Identity:123/578 - (21%)
Similarity:194/578 - (33%) Gaps:212/578 - (36%)


- Green bases have known domain annotations that are detailed below.


  Fly    52 LIIGAGGLGCELLKDLALMGF-----GNLHVIDMDTIELSNLNRQFLFRRTDIGASKAECAARFI 111
            |::|||.:|||:||..||:|.     |.:.|.|||.||.|||:||||||..|:...|||.||...
Mouse   423 LLVGAGAIGCEMLKVFALVGLGVRANGGVTVADMDYIERSNLSRQFLFRPKDVRRPKAEVAAAAA 487

  Fly   112 NARVPTCRVTPHFKKIQD-----FDESFYQQFHLVVCGLDSIVARRWINGMLLSMLRYEEDGTID 171
            :...|..|.||:...:..     :|:||:.:.:.||..|||..||.::.......|:        
Mouse   488 HRLNPDLRATPYTCPLDPTTEDIYDDSFFSRVNGVVAALDSFQARHYVAARCTHYLK-------- 544

  Fly   172 TSSIVPMIDGGTEGFKGNARVILPGFTACIE-CTLDLFPPQVNYPLCTIANTPRLPEHCIEYVK- 234
                 |:::.||:|..|:|.|.:|..|.... ...|.......||:||:.:.|...||.:::.: 
Mouse   545 -----PLLEAGTQGTWGSASVFVPYVTEAYRGPASDAASEDAPYPVCTLRHIPSSMEHSVQWAQD 604

  Fly   235 ---------------------------------IIQ-----------------------WE---- 239
                                             ::|                       |:    
Mouse   605 QFEGLFRLSTETINCYQQTCTSLSATDRTETLALLQQVMGVLRTRPQTWQDCVVWALGHWQLCFH 669

  Fly   240 ----------------------------------------------------------------- 239
                                                                             
Mouse   670 DKVLEGGTQFSSGSNKCPHPLQFDPNHDMHFLYVLAAANLYARMHGLPGSQSQPALRELLTRLLE 734

  Fly   240 ----KQNPF---------------------GVPL-------DGDDPQHIGWIYERALERSNEFNI 272
                .||.|                     |.||       |.|...|:.::......|...:.|
Mouse   735 SDSRPQNLFSAEHGQEQLKELQETLDDWRKGPPLKPVLFVKDDDSNFHVDFVVAATDLRCQNYGI 799

  Fly   273 TGVTYRLVQGVVKHIIPAVASTNAAIAAACALEVFKLATSCYDSMANYLNFNDLDGIYTYTYEAE 337
            ..|.:..::.:|..||||:|::.|.:|....||::|:.:    .:.::..|.     ::|.:.||
Mouse   800 LPVNHARIKQIVGRIIPAIATSTAVVAGLLGLELYKVVS----GLRSHGTFR-----HSYLHLAE 855

  Fly   338 KSENCLACSNTPQPLPIEDPNTTTLEDVIKLLCDSPRFQLKS--------PALTTVMKDGKRRTL 394
             :....:..:.|......|...|.. |.:|:....|...|||        ..|...|....:..|
Mouse   856 -NHFIRSAPSAPAVQSFRDLKWTCW-DRLKVPAVQPERTLKSLLAHLQEEHGLKVEMLLHHQALL 918

  Fly   395 YMSGVKSIEEATRKNLTQSLGELGLHDGQQLTVTD-ATSP--SAMTLQLKYQSNEVEM 449
            |.||..|.::|  ::|...:.||..|      ||. ...|  ..:..:|..:..|.||
Mouse   919 YSSGWSSEKQA--QHLCLRVTELVQH------VTGWKPKPGLKVLVFELSCEGEEEEM 968

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Uba3NP_610913.1 ThiF 48..>220 CDD:279270 63/178 (35%)
Uba3_RUB 50..346 CDD:238765 95/462 (21%)
E2_bind 357..442 CDD:285976 23/95 (24%)
Uba7NP_076227.1 Ube1 1..961 CDD:273603 120/569 (21%)
Ube1_repeat1 5..386 CDD:238768
E1_4HB 254..317 CDD:292809
E1_enzyme_family 421..932 CDD:304554 112/534 (21%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0476
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
32.810

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