DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Uba3 and ula-1

DIOPT Version :9

Sequence 1:NP_610913.1 Gene:Uba3 / 36539 FlyBaseID:FBgn0263697 Length:450 Species:Drosophila melanogaster
Sequence 2:NP_001348740.1 Gene:ula-1 / 266650 WormBaseID:WBGene00006735 Length:543 Species:Caenorhabditis elegans


Alignment Length:421 Identity:88/421 - (20%)
Similarity:144/421 - (34%) Gaps:146/421 - (34%)


- Green bases have known domain annotations that are detailed below.


  Fly    53 IIGAGGLGCELLKDLALMGFGNLHVIDMDTIELSNLNRQFLFRRTDIGASKAECAARFI------ 111
            ::|:..|..|:||.|.|.|..:.:|:|...:|.:::.:.|.....|||.|:||.....:      
 Worm    32 VLGSDSLATEILKSLVLAGVQSFYVVDDAKVEQADIGQNFFLHADDIGRSRAEATLEKLTELNPS 96

  Fly   112 -----NARVPTCRVTPHFKKIQDFDESFYQQFHLVVCG-----LDSIVARRWINGMLLSMLRYEE 166
                 :::.||.......:|:..|.        :||..     :|:..|:      :|..:|   
 Worm    97 VSGSASSQPPTALAMEDVEKLTTFS--------VVVAANQNEEIDTTFAK------VLYNIR--- 144

  Fly   167 DGTIDTSSIVPMIDGGTEGFKGNARVILPGFTACIECTLDLFPPQVNYPLCTIANTPRLPEHCIE 231
                     ||.|...|.|..|..|:       ||:             ..||||:         
 Worm   145 ---------VPFICIKTFGLIGTIRI-------CIK-------------EHTIANS--------- 171

  Fly   232 YVKIIQWEKQNPFGVPLDGDDPQHIGWIYERALERSNEFNITGVTYRLVQGVVKHIIPAVASTNA 296
                   .::|| ...|..|.|      :.:.:|..||.|:..:|           :..:..|..
 Worm   172 -------HEENP-RPDLRLDAP------FSKLIEMINETNLDEMT-----------LEQLRHTPY 211

  Fly   297 AIAAACALEVFKLATSCYDSMANYLNFNDLDGIYTYTYEAEKSENCLACSNTPQPLPIEDPNTTT 361
            .:....|||||:...            ||.:...:.|.|.::.:..|.......    |:..|. 
 Worm   212 ILLHFKALEVFRKQR------------NDPEAFPSTTAERKELQAILMSFRRSS----EESGTK- 259

  Fly   362 LEDVIKLLCDSPRFQLKSPALTTVMKDGKRRTLYM-SGVKSIE----------------EATRKN 409
                     ||..|   ..|...|::..:|.|..: |.||||.                ||.|:.
 Worm   260 ---------DSENF---DEAKAAVIRAFQRTTFQIGSSVKSILSSPQCSTSTRPFWLICEALRRF 312

  Fly   410 LTQSLGELGLHDGQQLTVTDATSPSAMTLQL 440
            :|::...|.|..    |:.|.||.|:...:|
 Worm   313 VTENNNLLPLRG----TLPDMTSDSSRYTRL 339

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Uba3NP_610913.1 ThiF 48..>220 CDD:279270 38/182 (21%)
Uba3_RUB 50..346 CDD:238765 62/308 (20%)
E2_bind 357..442 CDD:285976 25/101 (25%)
ula-1NP_001348740.1 APPBP1_RUB 8..541 CDD:238770 88/421 (21%)
E1_enzyme_family <443..541 CDD:304554
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0476
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.810

Return to query results.
Submit another query.