DRSC/TRiP Functional Genomics Resources

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Protein Alignment Uba3 and atg-7

DIOPT Version :9

Sequence 1:NP_610913.1 Gene:Uba3 / 36539 FlyBaseID:FBgn0263697 Length:450 Species:Drosophila melanogaster
Sequence 2:NP_502064.1 Gene:atg-7 / 178005 WormBaseID:WBGene00010882 Length:647 Species:Caenorhabditis elegans


Alignment Length:364 Identity:77/364 - (21%)
Similarity:127/364 - (34%) Gaps:129/364 - (35%)


- Green bases have known domain annotations that are detailed below.


  Fly    47 TKCQVLIIGAGGLGCELLKDLALMGFGNLHV--IDMDTIELSNLNRQFL--FRRTDIGASKAECA 107
            ::.:|||:|||.|||.:.:  .|:|:|..|:  :|..|:..:|..||.|  |....:|..|||.|
 Worm   323 SQLKVLILGAGTLGCNIAR--CLIGWGVRHISFLDNSTVSYNNPVRQSLSEFEDARLGRGKAETA 385

  Fly   108 ARFINARVPTCRVTPH------------FKKIQDFD------ESFYQQFHLVVCGLDSIVARRWI 154
            ...|....|:.:.|.|            .|.:.:.:      |...:...:|...|||..| ||:
 Worm   386 QAAIQRIFPSIQATAHRLTVPMPGHSIDEKDVPELEKDIAKLEQLVKDHDVVFLALDSREA-RWL 449

  Fly   155 NGMLLS-----------------MLRY------EEDGTIDTSSIVP--------MIDGGTEGFKG 188
            ..:|.|                 ::|:      |....:.:|..||        ..|        
 Worm   450 PTVLASRHKKIAISVAIGFDTYVIIRHGIGSRSESVSDVSSSDSVPYSQLSCYFCSD-------- 506

  Fly   189 NARVILPGFTACIECTLDLFPPQVNYPLCTIA--NTPRLPEH-CIEYV-KIIQWEKQNPFGVPLD 249
               |..|| .:..:.|||        ..||:|  .|..:... .:|.: .::|:  .:|...|..
 Worm   507 ---VTAPG-NSTFDRTLD--------QQCTVARPGTSMIASGIAVELLSSVLQY--PDPLKTPAS 557

  Fly   250 GDDPQHIGWIYERALERSNEFNITGVTYRLVQGVV---KHIIPAVASTNAAIAAACAL------- 304
            .||                ...:.|.....::|.:   :.|:|:|...:..:|...|:       
 Worm   558 HDD----------------NTTVLGAAPHQIRGFLGRFQQILPSVKRFDQCVACGDAIAAQFQQN 606

  Fly   305 ----------------EVFKLATSCYDSMANYLNFNDLD 327
                            ||..|     |.:.|.:|..|:|
 Worm   607 GWKFVRDVMNSPGRLEEVTGL-----DELQNSVNAIDID 640

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Uba3NP_610913.1 ThiF 48..>220 CDD:279270 54/224 (24%)
Uba3_RUB 50..346 CDD:238765 77/361 (21%)
E2_bind 357..442 CDD:285976
atg-7NP_502064.1 E1_like_apg7 4..635 CDD:273590 74/357 (21%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0476
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

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