DRSC/TRiP Functional Genomics Resources

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Protein Alignment Uba3 and uba3

DIOPT Version :9

Sequence 1:NP_610913.1 Gene:Uba3 / 36539 FlyBaseID:FBgn0263697 Length:450 Species:Drosophila melanogaster
Sequence 2:XP_012815865.1 Gene:uba3 / 100124303 XenbaseID:XB-GENE-947291 Length:462 Species:Xenopus tropicalis


Alignment Length:429 Identity:270/429 - (62%)
Similarity:340/429 - (79%) Gaps:6/429 - (1%)


- Green bases have known domain annotations that are detailed below.


  Fly    16 RFNGLRNILEREGPFCKDGFAASSENLEFLQTKCQVLIIGAGGLGCELLKDLALMGFGNLHVIDM 80
            |:|.::..|||.|||....|..|:|:|:||...|::|::|||||||||||:|||.||..:|||||
 Frog    36 RWNHVKKFLERSGPFTHPEFEPSNESLQFLLETCKILVVGAGGLGCELLKNLALSGFRQIHVIDM 100

  Fly    81 DTIELSNLNRQFLFRRTDIGASKAECAARFINARVPTCRVTPHFKKIQDFDESFYQQFHLVVCGL 145
            |||::||||||||||..|:|..|||.||.|||.|:|.|.|||||.|||||||:||::||::||||
 Frog   101 DTIDVSNLNRQFLFRPKDVGRPKAEVAAEFINTRIPDCCVTPHFTKIQDFDETFYREFHIIVCGL 165

  Fly   146 DSIVARRWINGMLLSMLRYEEDGTIDTSSIVPMIDGGTEGFKGNARVILPGFTACIECTLDLFPP 210
            |||:||||:||||:|:|.| |||.:..|:::|:|||||||||||:||||||.|||:||||:|:||
 Frog   166 DSIIARRWLNGMLMSLLNY-EDGVLQQSTVIPLIDGGTEGFKGNSRVILPGMTACVECTLELYPP 229

  Fly   211 QVNYPLCTIANTPRLPEHCIEYVKIIQWEKQNPF--GVPLDGDDPQHIGWIYERALERSNEFNIT 273
            |:|:|:||||:.|||||||||||:|:||.|:.||  ||.||||||:||.||:..:|||:.:|||.
 Frog   230 QINFPMCTIASMPRLPEHCIEYVRILQWPKEQPFGEGVQLDGDDPEHIQWIFMNSLERAKQFNIR 294

  Fly   274 GVTYRLVQGVVKHIIPAVASTNAAIAAACALEVFKLATSCYDSMANYLNFNDLDGIYTYTYEAEK 338
            ||||||.|||||.||||||||||.||||||.||||:|||.|..:.|||.|||:||:||||:||||
 Frog   295 GVTYRLTQGVVKRIIPAVASTNAVIAAACATEVFKIATSAYIPLNNYLVFNDVDGLYTYTFEAEK 359

  Fly   339 SENCLACSNTPQPLPIEDPNTTTLEDVIKLLCDSPRFQLKSPALTTVMKDGKRRTLYMSGVKSIE 403
            .|||.|||..||  .|:.|::..|::|:..|.:....|:||||:|..: |||.:|||:..|.|||
 Frog   360 KENCPACSQLPQ--NIQFPSSAKLQEVLDYLTNDTSLQMKSPAITATL-DGKNKTLYLQTVASIE 421

  Fly   404 EATRKNLTQSLGELGLHDGQQLTVTDATSPSAMTLQLKY 442
            |.||.||.::|.||||.|||:|.|.|.|:|..:..:|.:
 Frog   422 ERTRPNLCKTLKELGLVDGQELAVADVTTPQTVLFKLHF 460

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Uba3NP_610913.1 ThiF 48..>220 CDD:279270 120/171 (70%)
Uba3_RUB 50..346 CDD:238765 211/297 (71%)
E2_bind 357..442 CDD:285976 39/84 (46%)
uba3XP_012815865.1 Uba3_RUB 70..367 CDD:238765 211/297 (71%)
E2_bind 375..460 CDD:370142 39/85 (46%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 463 1.000 Domainoid score I473
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 1 1.000 - - H2951
Inparanoid 1 1.050 568 1.000 Inparanoid score I1055
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D256073at33208
OrthoFinder 1 1.000 - - FOG0005107
OrthoInspector 1 1.000 - - oto105584
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R1578
SonicParanoid 1 1.000 - - X3628
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
88.090

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