DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Uba3 and uba7

DIOPT Version :9

Sequence 1:NP_610913.1 Gene:Uba3 / 36539 FlyBaseID:FBgn0263697 Length:450 Species:Drosophila melanogaster
Sequence 2:XP_005155933.1 Gene:uba7 / 100001302 ZFINID:ZDB-GENE-121120-4 Length:1016 Species:Danio rerio


Alignment Length:603 Identity:127/603 - (21%)
Similarity:189/603 - (31%) Gaps:277/603 - (45%)


- Green bases have known domain annotations that are detailed below.


  Fly    48 KCQVLIIGAGGLGCELLKDLALMGF-----GNLHVIDMDTIELSNLNRQFLFRRTDIGASKAECA 107
            |.:..::|||.:||||||:.||:|.     |::.|.|||:||.||||||||||..|||..|:|.|
Zfish   426 KQKYFLVGAGAIGCELLKNFALIGLGAGEGGSITVTDMDSIERSNLNRQFLFRSQDIGRPKSEAA 490

  Fly   108 AR-------FINARVPTCRVTPHFKKIQDFDESFYQQFHLVVCGLDSIVARRWINGMLLSMLRYE 165
            |.       |:|......||....:::  :..|||.....|...||::.||.:::...:...:  
Zfish   491 AEAVKEMNPFMNIIAQQNRVCAETEEV--YTHSFYTGLDGVAAALDNVDARVYLDQCCVRNKK-- 551

  Fly   166 EDGTIDTSSIVPMIDGGTEGFKGNARVILPGFTACIECTLDLFPPQVNYPLCTIANTPRLPEH-- 228
                       ||::|||.|.||:..|::|..|.  ...|.....|...|:||:.|.|...||  
Zfish   552 -----------PMLEGGTLGSKGHTMVVVPRLTE--SYGLSSSGGQKAIPICTLKNFPHRIEHTL 603

  Fly   229 ------------------------------------------------------------CIEYV 233
                                                                        ||.:.
Zfish   604 QWARDHFEGLFKQTAQNVNNFLSDPGFVDRTVARGDVEAVEMLEGVYRSLSDDWPENWKDCISWA 668

  Fly   234 KIIQWE------------------------------KQNPFGVPLDGDDPQHIGWIYERALERSN 268
            : .|||                              |:.|..:..|.::..|:.:|...|...:.
Zfish   669 R-RQWETLYNNHIRQLLHCFPPDQLTSSGLPFWMGAKRCPHALTFDTNNATHMDFIIAAANLYAQ 732

  Fly   269 EFNITGVTYR-----LVQGV--------------------------------VK----------- 285
            .|.|||...|     ::|||                                ||           
Zfish   733 IFGITGSRNRADIQTVLQGVKVPEFTPKSSVKIAVTDQQLNEENEERKEEDKVKLGMLKEQLSKL 797

  Fly   286 -----------------------------------------------------HIIPAVASTNAA 297
                                                                 .||||:|:|.||
Zfish   798 QLRDRSFRMHPQDFEKDDDSNFHMDYIVAASNLRAENYDIPTADRHKSKLIAGRIIPAIATTTAA 862

  Fly   298 IAAACALEVFKLATSCYDSMANYLNFNDLDGIYTYTYEAEKSENCLACSNTPQPLPIEDPNTTTL 362
            ||....||::||... :..:.:|.|        .|.                        |..|.
Zfish   863 IAGLMCLELYKLVQG-HSKITSYRN--------AYI------------------------NLATQ 894

  Fly   363 EDVIKLLCDSPRFQLKSPALTTVMKDGKRRTLY----MSGVK-SIEEATRKNLTQSLGE------ 416
            ..|....|.:|.|.:.          |:|.:|:    :.|.: ..||.|.:.|.:.:.|      
Zfish   895 YFVFSQPCPAPTFTVA----------GQRYSLWDDFPVQGCREGQEEMTLEELLKHIEEEHKLKI 949

  Fly   417 LGLHDGQQLTVTDATSPS 434
            .||:.|..:..:|.::.|
Zfish   950 SGLYYGPAVLYSDLSNHS 967

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Uba3NP_610913.1 ThiF 48..>220 CDD:279270 65/183 (36%)
Uba3_RUB 50..346 CDD:238765 106/500 (21%)
E2_bind 357..442 CDD:285976 20/89 (22%)
uba7XP_005155933.1 Ube1 5..1013 CDD:273603 127/603 (21%)
Ube1_repeat1 10..393 CDD:238768
E1_4HB 258..326 CDD:292809
E1_enzyme_family 428..970 CDD:304554 126/601 (21%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
21.910

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