DRSC/TRiP Functional Genomics Resources

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Protein Alignment tum and arhgap45b

DIOPT Version :9

Sequence 1:NP_610912.2 Gene:tum / 36538 FlyBaseID:FBgn0086356 Length:625 Species:Drosophila melanogaster
Sequence 2:XP_005170570.1 Gene:arhgap45b / 555849 ZFINID:ZDB-GENE-071213-2 Length:1136 Species:Danio rerio


Alignment Length:658 Identity:137/658 - (20%)
Similarity:235/658 - (35%) Gaps:148/658 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly    11 DLRRCMQVLTDGTPEEEFLRFLRMFEQYHEKCAGY-AAETA--RIQNELDKSLTKMGDLEGKLFH 72
            :|||..||                   |..:|..| .|.||  |.:.|...:.||..|.:.:|  
Zfish   431 NLRRAKQV-------------------YMTRCEEYDKARTAANRAEEEGGSATTKTLDKKKRL-- 474

  Fly    73 ARRIIDMEIKARRQAE-----------------HERDAMESKIM-AVADLLRH-ERNLNNETRDK 118
                   |.:||.:||                 .|.:.|:..:: .:.::::. ::.:.:.|...
Zfish   475 -------EEEARNKAEEAEATYRTCIADAITQHQELEHMKVTVLRGIQEVIKQTDQTIRSATISY 532

  Fly   119 LAFLHTLPSSRKRKSLNAVREDKSYGDINSTGSLLSDLSI-----THSEDDFLDVRTSKSWREHR 178
            ...:|....:............|.|......|:.:.||.:     ||.|  |.....|...:..|
Zfish   533 YQIMHMQTVALPVHYQTLCESSKQYDPGQQYGTHVKDLQMSEEPETHYE--FEAYSASSVQQSVR 595

  Fly   179 PSLPKNQIPSVGNKRSRLSTGLNGSMSGTTP---------TTGKSRRSSVGIGVEQHTVDVGQGA 234
            |........:..:.....:.|..|..|.:..         .|.||..|:|.   :..:|..|.|.
Zfish   596 PRTDSANAEAQSSAEVPQTAGETGDTSSSQKDDQKRARGHMTHKSWGSTVS---DTDSVGGGSGL 657

  Fly   235 ERFCATTKVTIPQDGQGVIRAESTIESLPVIAGNERIGDGLSSTPRRSVLKEATAPPL-TP-VNA 297
            |.         |....|.|...:...|...::.||.|.:           |:|..... || :|.
Zfish   658 ES---------PTTSTGDISKMTRTSSTGTMSSNEDIDE-----------KDANVTSFETPNING 702

  Fly   298 MAPHVVAESGTPLQHRPLMR-NHTFSQKTFLRGDNCVQCQKRIRFGAVGLRCRDCPVRCHIDCRY 361
            :.|.:|..:| |.::..|.: ..|...:.......|.:|...:.|  .|..|.:|.:.||..|..
Zfish   703 IEPEIVVPTG-PFRNIGLSKAAQTHKLRKLRSPSKCRECDSYVYF--QGAECEECFLACHKRCLE 764

  Fly   362 LLTVSCVPQTGTPTTKTMTGYVTDFAPSIAPM-------IPALIVHCVNEIEARGLTEVGLYRLS 419
            .:.:.|       ..|.:.|.:..|......:       ||.:|..|:.|||.|.|...|:||::
Zfish   765 TIAIQC-------GHKKLQGRLQLFGQDFLQVSSNSPDGIPFIIKKCIAEIERRALRMKGIYRVN 822

  Fly   420 SSEREYKALKEQFLRGKATPHLGNTDIYVLCCCVKDFLRSLTEPLIPTSQWKDF----------- 473
            ..:...:.|.:.|..||....|..:..:.:...:|.:||.|.||::|...:...           
Zfish   823 GVKTRVEKLCQAFENGKELVELSQSSPHDISNVLKLYLRQLPEPIMPFRLYNSLMGLAKESLAVV 887

  Fly   474 ----ANAVQNPD-----TKTAQDMLV------KSVKQLPQANRDTLAFLILHFQRIAQCPVVL-- 521
                |::.:.||     .:|..::||      ..:|:||:.|..||.:|..|.:|||:    |  
Zfish   888 GPEGADSGKGPDLMDLGPETDPELLVLVDRLKNLLKELPKPNTATLRYLARHLRRIAE----LED 948

  Fly   522 ---MPIDNISLIFGPTIVGYSTPDPDQHAIYTEVFTQKQVMKALLELPVSFWEQYIVIDPTRTPA 583
               |...|:.::|||:::   .|.|....:.............::|..:.|:......:.:| ||
Zfish   949 DNKMSPSNLGIVFGPSLM---RPRPSGATVSLSSLVDYPYQARIVETLIVFYPSIFQSESSR-PA 1009

  Fly   584 TVIKRVPS 591
            :...|..|
Zfish  1010 SSSTRTQS 1017

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
tumNP_610912.2 C1 319..367 CDD:237996 10/47 (21%)
RhoGAP_MgcRacGAP 381..570 CDD:239847 52/226 (23%)
arhgap45bXP_005170570.1 BAR 309..553 CDD:299863 26/149 (17%)
C1 724..770 CDD:197519 10/47 (21%)
RhoGAP 782..996 CDD:295372 51/220 (23%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
10.910

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