DRSC/TRiP Functional Genomics Resources

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Protein Alignment tum and si:ch1073-416j23.1

DIOPT Version :9

Sequence 1:NP_610912.2 Gene:tum / 36538 FlyBaseID:FBgn0086356 Length:625 Species:Drosophila melanogaster
Sequence 2:XP_695377.7 Gene:si:ch1073-416j23.1 / 553480 ZFINID:ZDB-GENE-100922-35 Length:671 Species:Danio rerio


Alignment Length:685 Identity:218/685 - (31%)
Similarity:321/685 - (46%) Gaps:131/685 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly    12 LRRCMQVLT---DGTPEEEFLRFLRMFEQYHEKCAGYAAETARIQNELDKSLTKMGDLEGKLFHA 73
            |..|:|.|.   ....|.||:..:|.||...:|......|..:.:..|.||......||.||.||
Zfish    39 LSLCLQRLAIEEASNSELEFIEVVRNFEAARKKWLHAELELKKQKELLVKSDVARAALEVKLKHA 103

  Fly    74 RRIIDMEIKARRQAEHERDAMESKIMAVADLLRHERN----LNNETRDKL-AFLH---TLPSSRK 130
            |..:|:|||.|.:||.:...:|.::..:.|:|.|:..    ||:|.|..| :|.|   .:|..| 
Zfish   104 RNQLDVEIKKRYKAEADYQCLERQMQLICDVLVHDSKSNACLNDEQRSMLTSFSHKGACVPQHR- 167

  Fly   131 RKSLNAVREDKSYGDINSTGSLL--SDLSITHSEDD-------FLDVRTSKSWREHRPSL-PKNQ 185
            .|.|:.:.|          .|.|  ||:|...::||       |:....|::....|.|| |...
Zfish   168 GKRLSVIDE----------SSFLSHSDISYDRTDDDLDLDSTAFVKPLKSRARERRRSSLGPVVS 222

  Fly   186 IPSVGNKRSRLSTGLNGSMSGTTP-------TTGKSRRSSVGIGVEQH-TVDVGQGA-------- 234
            :|.  .||.|:| |.:|.:..:.|       |..|:..|:...|.:.| .:|:.|.|        
Zfish   223 LPV--PKRGRIS-GRSGDLLVSRPLEKEIETTVVKASVSTPETGSQIHMVIDITQEAPEHPSRAL 284

  Fly   235 --ERFCATTKVTIPQDGQGVIRAESTIESLPVIAGNERIGDGLSSTPRRSVLKEATAPPLTPVNA 297
              |.|.:..:.|.......||:||:.:|                                ..|:|
Zfish   285 RNEHFSSVAEQTSVWAHSEVIQAETMVE--------------------------------MEVSA 317

  Fly   298 MAPHVVAESGTPLQHRPLMRNHTFSQKTFLRGDNCVQCQKRIRFGAVGLRCRDCPVRCHIDCRYL 362
            :.|.|:.:. ||...:.:  .|.|.|||.:|.:.|:.|.||||||.:.::||||.|..|.:|:.|
Zfish   318 VEPAVLQDL-TPTVEKTV--QHVFQQKTVIRPETCLPCGKRIRFGKLAVKCRDCRVVSHPECKRL 379

  Fly   363 LTVSCVPQ---TGTPTTKTMTGYVTDFAPSIAPMIPALIVHCVNEIEARGLTEVGLYRLSSSERE 424
            ....|.|.   :..|..:|:    ..||||..|.||::||.||:|||.|||.|.|:||:...||:
Zfish   380 CPERCSPNAHGSSHPNEETL----ESFAPSTRPRIPSIIVQCVHEIERRGLEEKGIYRVPGGERQ 440

  Fly   425 YKALKEQFLRGKATPHLGNTD-IYVLCCCVKDFLRSLTEPLIPTSQWKDFANAVQNPDTKTAQDM 488
            .|.|:|::|.||....|...| ::.:|..:|||||.|:||||.....:.|..|.:..|...:.:.
Zfish   441 VKELREKYLYGKGPLMLHKVDEVHAVCGLLKDFLRKLSEPLITFKLHRTFMEASEMADEDKSVET 505

  Fly   489 LVKSVKQLPQANRDTLAFLILHFQRIAQCPVVLMPIDNISLIFGPTIVGYSTPDPDQHAIYTEVF 553
            |:|::::|||.||||||||:||.||:.|.|:..|.::|:|.:|||||:|::..:|....|..:..
Zfish   506 LLKTIRELPQPNRDTLAFLMLHLQRVMQSPLCQMDLNNLSRVFGPTIIGHAMSEPSPMTIMRDTN 570

  Fly   554 TQKQVMKALLELPVSFWEQYIV--IDPTRTPA--TVIKRV-PSNKNDL---------LSLYATPF 604
            ||.:|:..||..|..|||.::.  .||...|.  |.|..| ||...|.         ||.|:...
Zfish   571 TQPRVVARLLSFPSDFWEGFLAEENDPVNPPVIETNIASVCPSTSRDKIFKPLTSPELSKYSKTT 635

  Fly   605 KGGTIK---------------------KRKFYGTP 618
            .||:||                     |:||:.:|
Zfish   636 SGGSIKGRIKHFGGTFNNPSKPRNEPGKKKFFTSP 670

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
tumNP_610912.2 C1 319..367 CDD:237996 22/47 (47%)
RhoGAP_MgcRacGAP 381..570 CDD:239847 81/189 (43%)
si:ch1073-416j23.1XP_695377.7 C1 336..384 CDD:237996 22/47 (47%)
RhoGAP_MgcRacGAP 402..587 CDD:239847 81/184 (44%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 143 1.000 Domainoid score I4591
eggNOG 1 0.900 - - E1_KOG3564
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 299 1.000 Inparanoid score I2684
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D184774at33208
OrthoFinder 1 1.000 - - FOG0004815
OrthoInspector 1 1.000 - - otm26367
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR46199
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X3396
SwiftOrtho 1 1.000 - -
TreeFam 1 0.960 - -
ZFIN 00.000 Not matched by this tool.
1211.930

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