DRSC/TRiP Functional Genomics Resources

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Protein Alignment tum and Arhgap26

DIOPT Version :9

Sequence 1:NP_610912.2 Gene:tum / 36538 FlyBaseID:FBgn0086356 Length:625 Species:Drosophila melanogaster
Sequence 2:XP_006254722.1 Gene:Arhgap26 / 307459 RGDID:1310923 Length:814 Species:Rattus norvegicus


Alignment Length:604 Identity:115/604 - (19%)
Similarity:213/604 - (35%) Gaps:186/604 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly    89 HERDAMESKIMAVADLLRHERNLNNETRDKLAFLHTLP--SSRKRKSLNAVREDK--SYGDINST 149
            |.|:.::|.   .|:|.:..:.:....:|..:.:..|.  ||.|||..:::.|.|  ..||..:.
  Rat    17 HFRETLKSH---EAELDKTNKFIKELIKDGKSLISALKNLSSAKRKFADSLNEFKFQCIGDAETD 78

  Fly   150 GSLLSDLSITHSEDDFLDVRTSKSWREHRPSLPKNQIPSVGNKRSRLSTGLNGSMSGTTPTTGKS 214
                .::.|..|..:|..|                 :.::.::|||:..  |.|....||.. |.
  Rat    79 ----DEMCIARSLQEFATV-----------------LRNLEDERSRMIE--NASEVLITPLE-KF 119

  Fly   215 RRSSVGIGVEQHTVDVGQGAERFCATTK----VTIPQDGQGVIRAESTIESL------------- 262
            |:..:|...|... ...:..|::|.|.:    ::..:....:..|:|.::.:             
  Rat   120 RKEQIGAAREAKK-KYDKETEKYCGTLEKHLNLSSKKKESQLQEADSQVDLVRQHFYEVSLEYVF 183

  Fly   263 ---------------PVIA-----------GNERIGD----------GLSSTPRR---------S 282
                           |::|           |.|...|          .:.:|..|         |
  Rat   184 KVQEVQERKMFEFVEPLLAFLQGLFTFYHHGYELAKDFGDFKTQLTISIQNTRNRFEGTRSEVES 248

  Fly   283 VLKEATAPPLTPVNAMAPHVVAESGTPLQHRPL----MRNHTFSQKTFLRGDNCVQ--C-----Q 336
            ::|:.                  ...||:|:.:    |..:.:.|:....|.:.|:  |     .
  Rat   249 LMKKM------------------KENPLEHKTISPYTMEGYLYVQEKRHFGTSWVKHYCTYQRDS 295

  Fly   337 KRI-------RFGAVG-----LRCRDCPVR--CHIDCRYLLTVSCVPQTGTPTTKTM-------- 379
            |:|       :.|..|     :..:.|..|  ..|:.|:...|..|.:.|..|.:.:        
  Rat   296 KQITMVPFDQKSGGKGGEDESVTLKSCTRRKTDSIEKRFCFDVEAVDRPGVITMQALSEEDRRLW 360

  Fly   380 ---------------------TGYVTDFAPSIAPMIPALIVHCVNEIEARGLTEVGLYRLSSSER 423
                                 |..:.....||       |..|::.:|.||:.|.||||:.....
  Rat   361 MEAMDGREPVYNSNKDSQSEGTAQLDSIGFSI-------IRKCIHAVETRGINEQGLYRIVGVNS 418

  Fly   424 EYKALKEQFLRGKA-----TPHLGNTDIYVLCCCVKDFLRSLTEPLIPTSQWKDFANA--VQNPD 481
            ..:.|....:..||     |......:|..:...:|.:||.|..||:.....:.|..|  ::|.:
  Rat   419 RVQKLLSVLMDPKAASETETDICAEWEIKTVTSALKTYLRMLPGPLMMYQFQRSFIKAAKLENQE 483

  Fly   482 TKTAQDMLVKSVKQLPQANRDTLAFLILHFQRIA-QCPVVLMPIDNISLIFGPTIVGYSTPDPDQ 545
            |:.::  :...|.:||:.||..|..|:.|...:| .....||.:.|:.::||||::   .|..:.
  Rat   484 TRVSE--IHSLVHRLPEKNRQMLQLLMNHLANVANNHKQNLMTVANLGVVFGPTLL---RPQEET 543

  Fly   546 HAIYTEVFTQKQVMKALLE 564
            .|...::..|..|::.|:|
  Rat   544 VAAIMDIKFQNIVIEILIE 562

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
tumNP_610912.2 C1 319..367 CDD:237996 13/68 (19%)
RhoGAP_MgcRacGAP 381..570 CDD:239847 49/192 (26%)
Arhgap26XP_006254722.1 BAR_GRAF 19..225 CDD:153320 40/233 (17%)
BAR-PH_GRAF_family 267..371 CDD:269953 17/103 (17%)
PH 267..364 CDD:278594 17/96 (18%)
RhoGAP_Graf 364..563 CDD:239839 50/211 (24%)
SH3_GRAF 759..814 CDD:212997
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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