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Protein Alignment tum and Arhgap40
DIOPT Version :9
Sequence 1: | NP_610912.2 |
Gene: | tum / 36538 |
FlyBaseID: | FBgn0086356 |
Length: | 625 |
Species: | Drosophila melanogaster |
Sequence 2: | XP_008760659.2 |
Gene: | Arhgap40 / 296323 |
RGDID: | 1562428 |
Length: | 92 |
Species: | Rattus norvegicus |
Alignment Length: | 45 |
Identity: | 12/45 - (26%) |
Similarity: | 21/45 - (46%) |
Gaps: | 8/45 - (17%) |
- Green bases have known domain annotations that are detailed below.
Fly 453 VKDFLRSLTEPLIPTSQWKDFANAVQNPDTKTAQDMLVKSVKQLP 497
|...|:..||.|.|.||.:: .::|:..:|..:.|:.|
Rat 14 VTHVLKLFTEHLNPGSQPEE--------GSETSNSLLSDNTKKKP 50
|
Known Domains:
Indicated by green bases in alignment.
Gene | Sequence | Domain | Region |
External ID | Identity |
tum | NP_610912.2 |
C1 |
319..367 |
CDD:237996 |
|
RhoGAP_MgcRacGAP |
381..570 |
CDD:239847 |
12/45 (27%) |
Arhgap40 | XP_008760659.2 |
None |
Blue background indicates that the domain is not in
the aligned region.
|
Information from Original Tools:
Tool |
Simple Score |
Weighted Score |
Original Tool Information |
BLAST Result |
Score |
Score Type |
Cluster ID |
Compara |
0 | 0.000 |
Not matched by this tool. |
Domainoid |
0 | 0.000 |
Not matched by this tool. |
eggNOG |
0 | 0.000 |
Not matched by this tool. |
Hieranoid |
0 | 0.000 |
Not matched by this tool. |
Homologene |
0 | 0.000 |
Not matched by this tool. |
Inparanoid |
0 | 0.000 |
Not matched by this tool. |
OMA |
0 | 0.000 |
Not matched by this tool. |
OrthoDB |
0 | 0.000 |
Not matched by this tool. |
OrthoFinder |
0 | 0.000 |
Not matched by this tool. |
OrthoInspector |
0 | 0.000 |
Not matched by this tool. |
orthoMCL |
0 | 0.000 |
Not matched by this tool. |
Panther |
0 | 0.000 |
Not matched by this tool. |
Phylome |
1 |
0.910 |
- |
- |
|
|
SonicParanoid |
0 | 0.000 |
Not matched by this tool. |
SwiftOrtho |
0 | 0.000 |
Not matched by this tool. |
TreeFam |
0 | 0.000 |
Not matched by this tool. |
|
1 | 0.910 |
|
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