DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment tum and ARHGAP30

DIOPT Version :9

Sequence 1:NP_610912.2 Gene:tum / 36538 FlyBaseID:FBgn0086356 Length:625 Species:Drosophila melanogaster
Sequence 2:NP_001020769.1 Gene:ARHGAP30 / 257106 HGNCID:27414 Length:1101 Species:Homo sapiens


Alignment Length:190 Identity:48/190 - (25%)
Similarity:86/190 - (45%) Gaps:34/190 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly   394 IPALIVHCVNEIEARGLTEVGLYRLSSSEREYKALKEQFLRGKATPHLGNTDIYV--------LC 450
            :|.::..|...:|..|:.: |:||||......:.|:::| ..:..|.| ..|:|:        ||
Human    33 VPQVLKSCAEFVEEYGVVD-GIYRLSGVSSNIQKLRQEF-ESERKPDL-RRDVYLQDIHCVSSLC 94

  Fly   451 CCVKDFLRSLTEPLIPTSQWKDFANAVQNPDTKTAQDMLVK---SVKQLPQANRDTLAFLILHFQ 512
               |.:.|.|.:||:....:..||.||   ..:...:.|||   .:::||..|..||.||:.|..
Human    95 ---KAYFRELPDPLLTYRLYDKFAEAV---GVQLEPERLVKILEVLRELPVPNYRTLEFLMRHLV 153

  Fly   513 RIAQCPV-VLMPIDNISLIFGPTIV--------GYSTPDPDQHAIYTEVFTQKQVMKALL 563
            .:|.... ..|...|:::::.|.::        |::..     |.:.||..|..|::.:|
Human   154 HMASFSAQTNMHARNLAIVWAPNLLRSKDIEASGFNGT-----AAFMEVRVQSIVVEFIL 208

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
tumNP_610912.2 C1 319..367 CDD:237996
RhoGAP_MgcRacGAP 381..570 CDD:239847 48/190 (25%)
ARHGAP30NP_001020769.1 RhoGAP_CdGAP 16..210 CDD:239849 48/190 (25%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 224..243
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 300..400
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 451..529
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 621..906
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 965..991
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1050..1101
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
10.910

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