DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment tum and Myo9b

DIOPT Version :9

Sequence 1:NP_610912.2 Gene:tum / 36538 FlyBaseID:FBgn0086356 Length:625 Species:Drosophila melanogaster
Sequence 2:XP_006509629.1 Gene:Myo9b / 17925 MGIID:106624 Length:2164 Species:Mus musculus


Alignment Length:633 Identity:134/633 - (21%)
Similarity:244/633 - (38%) Gaps:106/633 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly    46 AAETARIQNELDKSLTKMGDLEGKLFHARRIIDMEIKARRQAEHERDAMESKIMAVADLLRHERN 110
            ||.|...:..:..|.:.:..|..........||.:..:::.:.|::.:.:......|.|....:.
Mouse  1361 AALTPTEERRISFSTSDVSKLSPVKVQTSAEIDGDFSSKKPSIHKKKSGDPSAGPDAGLSPGSQG 1425

  Fly   111 LNNETRDKLAFLHTLPSSRKRKSLNAVREDKSYGDINSTGSLLSDLSITHSEDDFLDVRTSKSWR 175
             ::::..|..|||  .:..|:.||..|.|.:|.|     |....:.....:    |||.:|:..|
Mouse  1426 -DSKSAFKRLFLH--KAKDKKPSLEGVEETESNG-----GQAAQETPARKT----LDVPSSQQHR 1478

  Fly   176 EHRPSLP----KNQIPSVG----NKRSR-------------------LSTGLNGSMSGTTPTTGK 213
            ......|    ||:...||    :::.|                   |...:|...|..||    
Mouse  1479 HTTGEKPLKGKKNRNRKVGQITVSEKWRESVFRKITNANELKFLDEFLLNKVNDLRSQKTP---- 1539

  Fly   214 SRRSSVGIGVEQHTVDVGQGAERFCATTKV--TIPQDGQGVIRAESTIESLPVIAGNERIGDGLS 276
                     :|...:   :..|||.:..|.  ::| :|:..:..:..:|:..::..|.....|..
Mouse  1540 ---------IESLFI---EATERFRSNIKTMYSVP-NGKIHVGYKDLMENYQIVVSNLAAERGEK 1591

  Fly   277 STPR-----RSVLKEATAPPLTPVNAMAPHVVAESGTPLQHRPLMRN--HTFSQKTFLRGDNCVQ 334
            .|..     :|:|.|.|..........|....|:.....|.|.:..:  |.|:........:|.|
Mouse  1592 DTNLVLNVFQSLLDEFTRSYNKTDFERAKQSKAQKKKRKQERAVQEHNGHVFASYQVNIPQSCEQ 1656

  Fly   335 CQKRIRFGAVGLRCRDCPVRCHIDCRYLLTVSCVPQTGTPTTKTMT-----GYVTDFAPSIAPMI 394
            |...|......|.|..|.:.||..|.:.:...| ..||...::...     |...|...|....:
Mouse  1657 CLSYIWLMDKALLCSVCKMTCHKKCVHKIQSYC-SYTGRRKSELGAEPGHFGVCVDSLTSDKASV 1720

  Fly   395 PALIVHCVNEIEARGLTEVGLYRLSSSEREYKALKEQFLRGKATPHLGNTDIYVLCCCVKDFLRS 459
            |.::...:..:|..||...||||.|.:....:.|::......|...|.:..|:.:...:|.:||.
Mouse  1721 PIVLEKLLEHVEMHGLYTEGLYRKSGAANRTRELRQALQTDPAAVKLEDFPIHAITGVLKQWLRE 1785

  Fly   460 LTEPLIPTSQWKDFANAVQNPDTKTAQDMLVKSVKQLPQANRDTLAFLILHFQRIAQCPVVLMPI 524
            |.|||:..:|:.||..||:.|:.:.....:...:..||:||..:|..||.|..::|    :|..:
Mouse  1786 LPEPLMTFAQYGDFLRAVELPEKQEQLSAIYAVLDHLPEANHTSLERLIFHLVKVA----LLEDV 1846

  Fly   525 DNIS-----LIFGPTIVGYSTPD--------PDQHAIYT--EVFTQKQVMKALLELPVSFWEQYI 574
            :.:|     :||.|.::  ..||        .|...|.|  |:..::|:.|..:::     |:..
Mouse  1847 NRMSPGALAIIFAPCLL--RCPDNSDPLTSMKDVLKITTCVEMLIKEQMRKYKMKM-----EEIN 1904

  Fly   575 VIDPTRTPATVIKRVPSNKNDL---LSL-YATPFKGGTIKKRKFYGTP 618
            .::...:.|  .:|:...:.:.   |.| :::|::|..||..:   ||
Mouse  1905 HLEAAESIA--FRRLSLLRQNAPWPLKLGFSSPYEGVRIKSPR---TP 1947

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
tumNP_610912.2 C1 319..367 CDD:237996 12/47 (26%)
RhoGAP_MgcRacGAP 381..570 CDD:239847 51/203 (25%)
Myo9bXP_006509629.1 RA_Myosin-IXb 16..112 CDD:340737
MYSc_Myo9 160..977 CDD:276836
IQ 1014..1035 CDD:197470
IQ 1036..1058 CDD:197470
DUF4045 1207..>1495 CDD:372533 30/145 (21%)
C1 1641..1689 CDD:237996 12/47 (26%)
RhoGAP_myosin_IXB 1706..1891 CDD:239872 49/190 (26%)
PHA02682 <2029..>2123 CDD:177464
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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