DRSC/TRiP Functional Genomics Resources

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Protein Alignment tum and tag-325

DIOPT Version :9

Sequence 1:NP_610912.2 Gene:tum / 36538 FlyBaseID:FBgn0086356 Length:625 Species:Drosophila melanogaster
Sequence 2:NP_001309440.1 Gene:tag-325 / 175636 WormBaseID:WBGene00008006 Length:840 Species:Caenorhabditis elegans


Alignment Length:431 Identity:95/431 - (22%)
Similarity:156/431 - (36%) Gaps:124/431 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly   225 QHTVDVGQGAER------FCATTKVTI--PQDGQGV---IRAESTIESLPVI-AGNERIGDGLSS 277
            |...||.:..:|      .|.|.|..:  |.|.:.|   ...|..:..||.. :.|:.:.|..:.
 Worm   462 QDNRDVQKKKQRKYIQLELCNTKKYLLRGPNDTEAVEWYKSLEEVVAKLPSPGSSNQPMIDVTNG 526

  Fly   278 TPRRSVLKEATAP------PLT--------PVNAMAPHVVAESGTPLQHRPLMRNHTFSQKTFLR 328
            ..|......:|.|      |::        |::..|...|:.|.:..:.||       |::|.: 
 Worm   527 VARNPSYIGSTRPLSHALIPISRSMRRRDDPMSQSAIETVSTSVSTDEPRP-------SKETII- 583

  Fly   329 GDNCVQCQKRIRFGAVGLRCRDCPVRCHIDCRYLLTVSCVPQTG----TPTTKTMTGYVTDFAPS 389
                   :|..||    .|.|.             ||..:.:.|    .|...:....:.....|
 Worm   584 -------EKLRRF----FRTRP-------------TVESLKEKGIYKPEPVFGSTLSAICQHENS 624

  Fly   390 IAPMIPALIVHCVNEIEARGLTEVGLYRLS------------SSEREYKALKEQFLRGKATPHLG 442
            :.|....:|...   ||::||...|:||:|            :.:..||||            :.
 Worm   625 LVPKFIRVITEV---IESKGLETDGIYRVSGNLSAVQKIRCQADQDNYKAL------------VS 674

  Fly   443 NTDIYVLCCCVKDFLRSLTEPLIPTSQWKDFANAVQNPDTKTAQDMLVKSVKQLPQANRDTLAFL 507
            ..||:||...:|.|.|.||:||.|.|..|::.:|:|.|:..|......:.:.:||..||:||..|
 Worm   675 EEDIHVLTGALKLFFRELTDPLFPISLHKEYTSAMQMPNATTRFKKFEELLSRLPNENRETLKML 739

  Fly   508 ILHFQRIA-QCPVVLMPIDNISLIFGPTIV---------------------------GYSTPDPD 544
            :.|..|:| ......|...|::::||||:.                           ..:||...
 Worm   740 LRHLNRVASHSSQNRMQQHNLAIVFGPTLFHNGDGAVNLATKNKKAGKKAKPSKKEETQATPVQS 804

  Fly   545 QHAIYTEVFTQKQVMKALLELPVSFWEQYIVIDPTRTPATV 585
            ...:...:..|.|:::.|||....|       |..:.|..:
 Worm   805 NSHLAFSMIMQSQIVQYLLESANKF-------DILKAPVNI 838

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
tumNP_610912.2 C1 319..367 CDD:237996 9/47 (19%)
RhoGAP_MgcRacGAP 381..570 CDD:239847 56/228 (25%)
tag-325NP_001309440.1 WW 101..130 CDD:278809
PH_ARHGAP9-like 391..509 CDD:270053 11/46 (24%)
PH 407..508 CDD:278594 11/45 (24%)
RhoGAP_ARHGAP27_15_12_9 611..825 CDD:239868 55/228 (24%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
21.910

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