DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment tum and AgaP_AGAP004000

DIOPT Version :9

Sequence 1:NP_610912.2 Gene:tum / 36538 FlyBaseID:FBgn0086356 Length:625 Species:Drosophila melanogaster
Sequence 2:XP_318459.5 Gene:AgaP_AGAP004000 / 1278822 VectorBaseID:AGAP004000 Length:2647 Species:Anopheles gambiae


Alignment Length:294 Identity:72/294 - (24%)
Similarity:117/294 - (39%) Gaps:58/294 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly   319 HTFSQKTFLR-GDNCVQCQKRIRFGAV-GLRCRDCPVRCHIDCRYLLTVSC-------------- 367
            ||| |.|.|. ...|..||:.:.:... ||.|::|.:.||..| |..:.||              
Mosquito  1843 HTF-QLTILNIATACEICQQFLLWPIERGLVCQNCKLTCHKKC-YQKSASCNKIANADPNSLLGA 1905

  Fly   368 -----------------------VPQT--GTPTTKTMTGYVTDFAPSIAPMIPALIVHCVNEIEA 407
                                   :|..  |.|.| .:.|..:|     ...|||.|...:..||.
Mosquito  1906 GGSGSAVVAGGCGPDGQPLYGGGIPTKLFGVPLT-ALCGNSSD-----GVKIPAQINKLIMMIEM 1964

  Fly   408 RGLTEVGLYRLSSSEREYKALKEQFLRGKATPHLG-------NTDIYVLCCCVKDFLRSLTEPLI 465
            .||...|:||.|....:.|.||.:..|...:...|       :.:::||...:|.|||.:.|||:
Mosquito  1965 HGLYSEGIYRKSGVSSKIKDLKAKMDRAVTSADGGGGEMDFESYNVHVLTNVLKSFLREMPEPLL 2029

  Fly   466 PTSQWKDFANAVQNPDTKTAQDMLVKSVKQLPQANRDTLAFLILHFQRIAQCPVV-LMPIDNISL 529
            ...::.||..|....|.......|:..||::|.|:......||.|...:|:.... .|...::::
Mosquito  2030 TFDRYDDFLRAADLSDGSDRVQTLLSLVKKIPPAHHCLFERLIFHLALVAKLEQYNRMSASSLAI 2094

  Fly   530 IFGPTIVGYSTPDPDQHAIYTEVFTQKQVMKALL 563
            :|.|.::..:...|.|.:: .::..|.:.|:.|:
Mosquito  2095 VFAPCVLRTNRYVPAQDSL-NDIGRQTKCMETLI 2127

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
tumNP_610912.2 C1 319..367 CDD:237996 17/49 (35%)
RhoGAP_MgcRacGAP 381..570 CDD:239847 49/191 (26%)
AgaP_AGAP004000XP_318459.5 RA 16..85 CDD:214612
MYSc 120..779 CDD:214580
MYSc_Myo9 130..771 CDD:276836
IQ 836..854 CDD:197470
C1 1602..1643 CDD:237996
C1 1843..1891 CDD:237996 17/49 (35%)
RhoGAP 1934..2127 CDD:295372 51/199 (26%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

Return to query results.
Submit another query.