DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment tum and AgaP_AGAP003944

DIOPT Version :9

Sequence 1:NP_610912.2 Gene:tum / 36538 FlyBaseID:FBgn0086356 Length:625 Species:Drosophila melanogaster
Sequence 2:XP_318402.5 Gene:AgaP_AGAP003944 / 1278773 VectorBaseID:AGAP003944 Length:1908 Species:Anopheles gambiae


Alignment Length:627 Identity:144/627 - (22%)
Similarity:223/627 - (35%) Gaps:165/627 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly    49 TARIQNELDKSLT----------KMGDLEGKLFHARRIIDMEIKARRQAEHE---RDAMESKIMA 100
            |.|:|:|.|.:::          .:.||..::..:..|...:       |:.   |.|..|.  |
Mosquito   551 TDRLQDEADGNVSAPEYSLPIRRDIRDLRNRITASPSIFTSD-------EYRAWLRRAPSSS--A 606

  Fly   101 VADLLRHERNLNNETRDKLAFLHTLPSS--------RKRKSLNAVREDKSYGDINSTGSLLSDLS 157
            :.:.:|..|:|.|:.|     .|....|        :..:.:.:.|.....|...:.|.::....
Mosquito   607 ICEQMRASRDLLNQQR-----AHRFSCSAENIHDVLKNTEHIYSSRTGLGMGGAGAGGGVVGGTL 666

  Fly   158 ITHS------EDDFLDVRT-------------SKSWREHRPSLPKNQIPSVGNKRSRLSTGLNGS 203
            ..||      ....|.||:             |.|.|..|..|...|...||.....:...|.|.
Mosquito   667 DRHSMAAGGPRMSSLPVRSLSSQHIGGPSSIRSPSVRRMRQLLELTQGAGVGGVPGSVVAALTGH 731

  Fly   204 MS-GTTPTTGKSR-RSSVGIGVEQHT--------VD-------------VGQGAERFCATTKVTI 245
            .| ..||:|...| ...:.|...::|        ||             .|:|......|:::..
Mosquito   732 QSPAPTPSTTLPRAHRQIDINPAEYTKYKLDKPVVDAVGMSGMLWIHLLAGRGLRAMSETSQIQQ 796

  Fly   246 P--QDGQGVIRAESTIESLPVIAGNERIGD-----------GLSSTPRRSVLKEATAPPLTPVNA 297
            |  :|...|:..:...::..|:    |.||           .|....:..||..:..|       
Mosquito   797 PLIRDLYCVLECDRIHKARTVV----RSGDLQFDWDESFELDLVCNKQLDVLVYSWDP------- 850

  Fly   298 MAPHVVAESGTPLQHR-PLMRNHTFSQKTFLRGDNCVQCQKRIR-FGAVGLRCRDCPVRCHIDCR 360
                         ||| .|......|..|.||.....|...::. .|.:.||.|      |.|..
Mosquito   851 -------------QHRHKLCYRGALSLTTLLRQSPIHQLALKVEPRGTIYLRLR------HTDPF 896

  Fly   361 YLLTVSCVPQTGTPTTK------------TMTGYVTDFAPSIAPMIPALIVHCVNEIEARGLTEV 413
            .|..     :.|.|:.:            |:....:..||..|| :|.::..||.|:|.|||..:
Mosquito   897 QLFR-----RRGLPSLRGNVPALFGADLETVVTRESKGAPGCAP-VPIILRRCVEEVERRGLDII 955

  Fly   414 GLYRLSSSEREYKALKEQFLRG----KATP-HLGNTDIYVLCCCVKDFLRSLTEPLIPTSQWKDF 473
            |||||..|..:.:.|:|.|.|.    :.|| |:  .||.|:...:||:||.|.|||.....::..
Mosquito   956 GLYRLCGSATKKRLLREAFERNSRAVELTPEHV--PDINVITGVLKDYLRELPEPLFTKCLFQMT 1018

  Fly   474 ANA--VQNPDTKTAQDMLVKSVKQ-LPQANRDTLAFLILHFQRIAQCPV-VLMPIDNISLIFGPT 534
            .:|  |..||.......|:.|:.. ||:|||.||.||:.|...:..... ..|....::...||.
Mosquito  1019 VDALGVCLPDDPEGNAKLMLSILDCLPRANRATLVFLLDHLSLVVSAAERNKMSAQALATALGPP 1083

  Fly   535 IVGYSTP----DPDQHAIYTEVFTQKQVMKALLELPVSFWEQ 572
            ::.:|..    :...||      ....|:|.||::    |.|
Mosquito  1084 LMLHSASVGANEEIDHA------QPIAVLKYLLQI----WPQ 1115

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
tumNP_610912.2 C1 319..367 CDD:237996 12/48 (25%)
RhoGAP_MgcRacGAP 381..570 CDD:239847 62/201 (31%)
AgaP_AGAP003944XP_318402.5 PDZ_signaling 140..223 CDD:238492
C2 775..874 CDD:175973 22/122 (18%)
RhoGAP 915..1114 CDD:295372 63/211 (30%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

Return to query results.
Submit another query.