DRSC/TRiP Functional Genomics Resources

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Protein Alignment tum and arhgap21a

DIOPT Version :9

Sequence 1:NP_610912.2 Gene:tum / 36538 FlyBaseID:FBgn0086356 Length:625 Species:Drosophila melanogaster
Sequence 2:NP_001340279.1 Gene:arhgap21a / 101883923 ZFINID:ZDB-GENE-090918-5 Length:1939 Species:Danio rerio


Alignment Length:633 Identity:116/633 - (18%)
Similarity:216/633 - (34%) Gaps:202/633 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly    84 RRQAEHERDAMESKIMAVADLLRHERN----LNN--ETRDKLAFLHTLPSSRKRKSLNAVREDKS 142
            |||..|::|::...|:.........|:    |:|  |.|...:..||......||:::...||..
Zfish   845 RRQLSHDQDSLRLTILESDSKTERSRSFDEGLDNYREERRGRSIKHTHGFKGLRKAVDRCSEDSG 909

  Fly   143 ---------YGDINSTGSLLSDLSITHSEDDFLDVRTSKSWREHRPSLPKNQIPSVGNKRSRLST 198
                     :.|....|||.  ....:||.......:.:||::....|..:.:....:||     
Zfish   910 SRRDSNSDVFTDATKEGSLY--FRQLNSEKSKRVGSSMRSWKQIYAVLRGHCLYLYKDKR----- 967

  Fly   199 GLNGSMSGTTPTTGKSRRSSVGIGVEQHTVDVG---------------------QGAERFCATTK 242
                  .|.|....:.....:.|.::...:|:.                     |..:|....:.
Zfish   968 ------DGQTNANSQIEEEPLPISIKACLIDISYSDTKRKNVLRLTTSDCEYLFQAEDREEMLSW 1026

  Fly   243 VTIPQDGQGVIRAESTIESLPVIAGNERI-----------------------------------G 272
            :.:.|:...:....:|:.|..:|  |.:|                                   |
Zfish  1027 IRVIQENSNLDEENATVTSTDLI--NRKIKEYNTLMSPPSSKTEPSPKASRQSLSIRQTLLGGKG 1089

  Fly   273 DGLSSTP--------RRSVLKEATAPPLTPVNAMAPHVVAESGTPLQHRPLMRNHTFSQK----- 324
            :..:::|        |:::.|:.|:||            .:.||..:..|.:....|.:|     
Zfish  1090 ENKATSPHSPNKEHDRKAMHKDETSPP------------KDKGTWRKGIPGLMRKPFEKKPSPGV 1142

  Fly   325 TFLRGDNCVQCQKRIRFGAVGLRCRDCPVRCHIDCRYLLTVSCVPQTGTPTTKTMTGYVTDFAPS 389
            ||                  |:|..|||                     |.....          
Zfish  1143 TF------------------GVRLDDCP---------------------PAQNNR---------- 1158

  Fly   390 IAPMIPALIVHCVNEIEARGLTEVGLYRLSSSEREYKALKEQF-LRGKATPHLGN---TDIYVLC 450
               .:|.::..|.|.:|.|||...|:||:..:......::|:. .:|.|...:.:   .|:.|:.
Zfish  1159 ---FVPLIVEVCCNLVEERGLEYTGIYRVPGNNAAISIMQEELNNKGMADIDIQDDKWKDLNVIS 1220

  Fly   451 CCVKDFLRSLTEPLIPTSQWKDF--ANAVQNPDTKTAQDMLVKSVKQLPQANRDTLAFLILHFQR 513
            ..:|.|.|.|.|||....::.||  .|.:::|..:.  .:|.:.:.:||..:.:||.||..|.:.
Zfish  1221 SLLKSFFRKLPEPLFTNERYADFIDGNRIEDPVERL--KVLKRLLHELPDHHYETLKFLSAHLKT 1283

  Fly   514 IAQ-CPVVLMPIDNISLIFGPTIVGYS--------TPDPDQHAIYTEVFTQKQVMKALLELPVSF 569
            :|: .....|...|::::||||:|..|        |..|||:.|              :|..:..
Zfish  1284 VAENSEKNKMEPRNLAIVFGPTLVRTSEDNMTHMVTHMPDQYKI--------------VETLIQH 1334

  Fly   570 WEQYIVIDPTRTPATVIKR--------VPSNKNDLLSLYATPFKGGTI 609
            ::.:...:....|.|.::.        ||:..:.|.::..|....|.:
Zfish  1335 YDWFFTEEGDNEPTTTVQEESAVESQPVPNIDHLLTNIGRTGTSPGEV 1382

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
tumNP_610912.2 C1 319..367 CDD:237996 9/52 (17%)
RhoGAP_MgcRacGAP 381..570 CDD:239847 49/203 (24%)
arhgap21aNP_001340279.1 PDZ_signaling 53..128 CDD:238492
PH_ARHGAP21-like 923..1037 CDD:269955 17/126 (13%)
RhoGAP_ARHGAP21 1143..1339 CDD:239860 57/263 (22%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
10.910

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