DRSC/TRiP Functional Genomics Resources

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Protein Alignment tum and arhgap44b

DIOPT Version :9

Sequence 1:NP_610912.2 Gene:tum / 36538 FlyBaseID:FBgn0086356 Length:625 Species:Drosophila melanogaster
Sequence 2:XP_021336115.1 Gene:arhgap44b / 100333556 ZFINID:ZDB-GENE-120206-2 Length:862 Species:Danio rerio


Alignment Length:511 Identity:95/511 - (18%)
Similarity:178/511 - (34%) Gaps:152/511 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly    79 MEIKARRQAEHERDAMESKIMAVADLLRHERNL------NNETRDKLAFL-----------HTLP 126
            ::|.:||:.....:|.:::::: .|||:.|:.|      ::.|..||:..           .::.
Zfish     8 LQISSRRKRRAPPEAEKTEVLS-DDLLQVEKRLELVKQVSHSTHKKLSACLQGQQCVEVDKRSVR 71

  Fly   127 SSRKRKSLNAVREDKSYGDINSTGSLLSD-------LSITHSEDDFL-------DVRTSKSWREH 177
            |..|:..|.::.:....|     .::|.|       |.|.....|.|       :::..:...|.
Zfish    72 SPSKKLPLTSLAQCLVEG-----AAVLGDDCLLGKMLKICGEAQDSLAQELLLFELQIERDVVEP 131

  Fly   178 RPSLPKNQIPSVGNKRSRLSTGLNGSMSGTTPTTGKSRRSSVGIGVEQHTVDVGQGAERFCATTK 242
            ..:|.:.:||::..:|..|:. |...|........:|.:||.....|..|     ||        
Zfish   132 LYTLSEVEIPNIQKQRKHLAK-LVLDMDSARTRWHQSSKSSTLSNKETPT-----GA-------- 182

  Fly   243 VTIPQDGQGVIRAESTIESLPVIAGNERI-GDGLSSTPRRSVLKEAT----------------AP 290
                       :|::..|.:...|....| .|.||:.....|.||..                ..
Zfish   183 -----------KADALREEMEEAANRMEICRDQLSADMYSFVAKEIDYANYFQTLIEVQAEYHRK 236

  Fly   291 PLTPVNAMAPHVVAESGT----PLQHRPLMRNHTFSQKTFLRGDNCVQCQKRIRFGAVGLRCRDC 351
            .|..:.::.|.:.|:..:    |...:||..:.|.|             .:.|.|          
Zfish   237 SLELLQSVLPQIKAQQESWVEKPCYGKPLEEHLTLS-------------GREIAF---------- 278

  Fly   352 PVRCHIDCRYLLTVSCVPQTGTPTTKTMTGYVTDFAPSIAPMIPALIVHCVNEIEARGLTEVGLY 416
            |:.           :||                           .:::.|       ||.|.||:
Zfish   279 PIE-----------ACV---------------------------TMLLDC-------GLQEEGLF 298

  Fly   417 RLSSSEREYKALKEQFLRGKATPHLGNTDIYVLCCCVKDFLRSLTEPLIPTSQWKDFANAVQNPD 481
            |::.|..:.|.||.....|.......:.|.:.:...:|.:||.|.|||:....::|:..|....|
Zfish   299 RVAPSASKLKKLKASLDCGVLDYQEYSADPHAIAGALKSYLRELPEPLLTFDLYEDWIQASNIAD 363

  Fly   482 TKTAQDMLVKSVKQLPQANRDTLAFLILHFQRIAQCPVV-LMPIDNISLIFGPTIV 536
            .......|:.:.::||.||.:...:||....::.:.... .|...||:::.||.::
Zfish   364 QDKRLQALLSTCEKLPVANSNNFKYLIKFLAKMNEYQEYNKMTPGNIAIVLGPNLL 419

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
tumNP_610912.2 C1 319..367 CDD:237996 5/47 (11%)
RhoGAP_MgcRacGAP 381..570 CDD:239847 35/157 (22%)
arhgap44bXP_021336115.1 BAR 22..268 CDD:325158 50/276 (18%)
RhoGAP 257..457 CDD:295372 45/231 (19%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
21.910

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