DRSC/TRiP Functional Genomics Resources

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Protein Alignment tum and arhgap45

DIOPT Version :9

Sequence 1:NP_610912.2 Gene:tum / 36538 FlyBaseID:FBgn0086356 Length:625 Species:Drosophila melanogaster
Sequence 2:XP_012822956.2 Gene:arhgap45 / 100125789 XenbaseID:XB-GENE-990078 Length:1114 Species:Xenopus tropicalis


Alignment Length:670 Identity:138/670 - (20%)
Similarity:237/670 - (35%) Gaps:176/670 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly    26 EEFLRFLRMFEQYHEKCAGYAAETARIQNELDKSLTKMGDLEGKLFHARRIIDMEIKARRQAEHE 90
            :.||:.:.|..|.|||      ....::.:..::..|:.:.|..|..||     :...:|..|||
 Frog   356 QTFLQPINMRRQEHEK------RRKEVKEQWQRAQRKLMEAESNLRKAR-----QAYMQRSEEHE 409

  Fly    91 R----------DAMESKIMAVADLLRHERNLNNETRDKLAFLHTLPSSRKRK-------SLNAVR 138
            |          :...|...::....|.|....|...:.:|...|..:..|.:       .:|.:|
 Frog   410 RALYNATRAEEEQSHSGTRSLDKKRRAEEEAKNRAEEAMATYRTCIADAKTQKQELEDVKVNVLR 474

  Fly   139 EDKSYGDINSTGSLLSDLSITHSED---------------------------------------- 163
            :.:..  |..:..:|...:|::.:.                                        
 Frog   475 QLQEL--IKQSDQILRSATISYYQSMHMQTAPLPVGFQTLCESSKLYDLGQQYASYVRQLGAVNE 537

  Fly   164 -----DFLDVRTSKSW----REHRPSLPKNQIPSVGNKRSRLSTGLNGSMSGTTPTTGKSRRSSV 219
                 ||.......:|    |..:.|.....|||..||          .:||.....  .||.  
 Frog   538 PETTYDFQPYTPQITWSPCIRSRKSSFNSQDIPSSENK----------EISGEERVV--ERRG-- 588

  Fly   220 GIGVEQH-----TVDVGQGAERFCATTKVTIPQDGQGVIRAESTIESLPVIAGNERIGDGLSSTP 279
            |.|.:.|     .:..|..|   .:.|....|:...........::...:.|..|:..:|||.:.
 Frog   589 GRGHQVHKSWPTAITEGDPA---VSNTGTAFPEKLHQPSSPIDIVDQKRLSASFEQSINGLSGSL 650

  Fly   280 RRSVLKEATAPPLTPVNAMAPHVVAESGTPLQHRPLMRNHTFSQKTFLRGDNCVQCQKRIRFGAV 344
            .   :..:|.|...         :..|...|.|| |.:..|.|:        |.:|...:.|  .
 Frog   651 E---VPHSTGPFRN---------IGLSRAALTHR-LRKLRTPSK--------CRECNSYVYF--Q 692

  Fly   345 GLRCRDCPVRCHIDCRYLLTVSCVPQTGTPTTKTMTG----YVTDFAPSI--AP-MIPALIVHCV 402
            |..|.:|.:.||..|...|.:.|       ..|.:.|    :..||:.:.  :| .||.||..||
 Frog   693 GAECEECSLACHKKCLETLAIQC-------GHKKLQGRLLLFGRDFSETALRSPDHIPFLIRKCV 750

  Fly   403 NEIEARGLTEVGLYRLSSSEREYKALKEQFLRGKATPHLGNTDIYVLCCCVKDFLRSLTEPLIPT 467
            :|||.|.||..|:||::..:...:.|.:.|..||....|.....:.|...:|.:||.|.|||||.
 Frog   751 SEIEERALTMKGIYRVNGVKTRVEKLCQAFENGKELVELSQASPHDLSNVLKLYLRQLPEPLIPF 815

  Fly   468 SQW-------KDFANAVQ----------NPDTKTAQDMLVKSVKQ----LPQANRDTLAFLILHF 511
            ..:       |:....::          .|:|:.....:|..:|:    ||..||.||.:|:.|.
 Frog   816 RLYNGLMGLAKESLRGIETGKGSRLQDKGPNTEPEVLSMVVQLKELLQDLPVENRTTLQYLVKHL 880

  Fly   512 QRIA-QCPVVLMPIDNISLIFGPTIVGYSTPDPDQHAIYTEVFTQKQVMKALLELPVSFWEQYIV 575
            .|:: |..:..|...|:.::|||.::   .|.|....:         .:.:|::.|    .|..:
 Frog   881 CRVSEQEQLNKMSPSNLGIVFGPALM---RPRPTDATV---------SLSSLVDYP----HQARI 929

  Fly   576 IDPTRTPATVIKRVPSNKND 595
            ::......:.|.:.|::.:|
 Frog   930 VETLIIFYSTIFQEPASSSD 949

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
tumNP_610912.2 C1 319..367 CDD:237996 12/47 (26%)
RhoGAP_MgcRacGAP 381..570 CDD:239847 58/217 (27%)
arhgap45XP_012822956.2 PRK12495 <22..151 CDD:183558
BAR 289..515 CDD:416402 29/171 (17%)
C1_GMIP-like 669..719 CDD:410366 17/67 (25%)
RhoGAP 727..936 CDD:413382 58/224 (26%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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