DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG6553 and lrp1bb

DIOPT Version :10

Sequence 1:NP_610911.1 Gene:CG6553 / 36537 FlyBaseID:FBgn0033880 Length:319 Species:Drosophila melanogaster
Sequence 2:XP_073769005.1 Gene:lrp1bb / 559293 ZFINID:ZDB-GENE-070912-401 Length:4666 Species:Danio rerio


Alignment Length:133 Identity:48/133 - (36%)
Similarity:64/133 - (48%) Gaps:8/133 - (6%)


- Green bases have known domain annotations that are detailed below.


  Fly    27 QNATSCGHRCGGGDCIQLDQLCDGSANCLDGSDETVAMCEKVWCPGYAFRCSYGACIASTAVCDG 91
            |...|...:|..|.||:::.:|||..:|||||||...:|....||...|:|....||....:|||
Zfish   877 QRCRSDEFQCRNGRCIRVNWICDGDDDCLDGSDEEPHICSNHSCPIDQFKCPSNRCIPKRWLCDG 941

  Fly    92 VQDCVDGSDEQGWLCRAQMQQANCDNWEMYCSSGQCMTYSKLCDGIRDCRDGDDELES----LCE 152
            ..||.|..||....|.||    .|...:..|.:|:|:..:..||...||.|..||..|    .||
Zfish   942 ADDCGDNEDESNKTCSAQ----PCRAGQFTCGNGRCVPEAWRCDQDDDCGDMSDESTSCSFPTCE 1002

  Fly   153 GVT 155
            .::
Zfish  1003 ALS 1005

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG6553NP_610911.1 LDLa 34..60 CDD:197566 12/25 (48%)
LDLa 70..101 CDD:197566 12/30 (40%)
LDLa 115..146 CDD:197566 9/30 (30%)
lrp1bbXP_073769005.1 None

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