| Sequence 1: | NP_610911.1 | Gene: | CG6553 / 36537 | FlyBaseID: | FBgn0033880 | Length: | 319 | Species: | Drosophila melanogaster |
|---|---|---|---|---|---|---|---|---|---|
| Sequence 2: | NP_001025454.1 | Gene: | ldlra / 387529 | ZFINID: | ZDB-GENE-031217-1 | Length: | 911 | Species: | Danio rerio |
| Alignment Length: | 305 | Identity: | 84/305 - (27%) |
|---|---|---|---|
| Similarity: | 111/305 - (36%) | Gaps: | 77/305 - (25%) |
- Green bases have known domain annotations that are detailed below.
|
Fly 10 IQLVIFLSLAVTI-CLGSQNATSCGHR---CGGGDCIQLDQLCDGSANCLDGSDETVAMCEKVWC 70
Fly 71 PGYAFRCS--YGACIASTAVCDGVQDCVDGSDEQGWLCRAQMQQANCDNWEMYCSSGQCMTYSKL 133
Fly 134 CDGIRDCRDGDDELESLCEGVTIPTTTVSSTTSTTTESSIHRI-----------------TPTVP 181
Fly 182 VTRKASRPNPLQE------NGECVVP-------------------QLPNVMVKHFT--DAILTVG 219
Fly 220 SRVANGTRIYYDCPAEHRLKGENQNICQDALWARKFPYCETPQAY 264 |
| Gene | Sequence | Domain | Region | External ID | Identity |
|---|---|---|---|---|---|
| CG6553 | NP_610911.1 | LDLa | 34..60 | CDD:197566 | 11/28 (39%) |
| LDLa | 70..101 | CDD:197566 | 10/32 (31%) | ||
| LDLa | 115..146 | CDD:197566 | 14/30 (47%) | ||
| ldlra | NP_001025454.1 | LDLa | 23..55 | CDD:197566 | 12/31 (39%) |
| LDLa | 65..101 | CDD:238060 | 13/37 (35%) | ||
| LDLa | 106..140 | CDD:238060 | 16/35 (46%) | ||
| LDLa | 144..176 | CDD:197566 | 4/31 (13%) | ||
| Ldl_recept_a | 192..227 | CDD:395011 | 4/34 (12%) | ||
| Ldl_recept_a | 231..266 | CDD:395011 | 11/48 (23%) | ||
| LDLa | 274..304 | CDD:238060 | 1/5 (20%) | ||
| FXa_inhibition | 314..348 | CDD:464251 | |||
| EGF_CA | 350..380 | CDD:214542 | |||
| Ldl_recept_b | 437..482 | CDD:459654 | |||
| Ldl_recept_b | 485..525 | CDD:459654 | |||
| LY | 510..551 | CDD:214531 | |||
| Ldl_recept_b | 572..612 | CDD:459654 | |||
| FXa_inhibition | 623..664 | CDD:464251 | |||
| PHA03247 | <666..808 | CDD:223021 | |||
| Blue background indicates that the domain is not in the aligned region. | |||||