Protein Alignment CG6553 and Ldlrad3

DIOPT Version :10

• Sequence 1: NP_610911.1
• Gene: CG6553 / 36537
• FlyBaseID: FBgn0033880
• Length: 319
• Species: Drosophila melanogaster
• Sequence 2: NP_001388799.1
• Gene: Ldlrad3 / 366138
• RGDID: 1307846
• Length: 345
• Species: Rattus norvegicus
• Alignment Length: 167
• Identity: 56/167 - (33%)
• Similarity: 74/167 - (44%)
• Gaps: 15/167 - (8%)

  Fly    13 VIFLSLAVTICLGSQNATS-C----GHRCGGGDCIQLDQLCDGSANCLDGSDETVAMCEKVWCPG 72
            ::..|.|.:..|...|.|: |    ...|..|.||.....|||..:|.|.|||......|..|..
  Rat     9 LLLSSTAESQLLPGNNFTNECNIPGNFMCSNGRCIPGAWQCDGLPDCFDKSDEKECPKAKSKCGP 73

  Fly    73 YAFRCSYGA-CIASTAVCDGVQDCVDGSDEQGWLCRAQMQQANCDNWEMYCSSGQCMTYSKLCDG 136
            ..|.|:.|. ||.....|:|.:||.|||||:.  |.|  ....|.....:|.:|.|:..|.:|||
  Rat    74 TFFPCASGIHCIIGRFRCNGFEDCPDGSDEEN--CTA--NPLLCSTARYHCRNGLCIDKSFICDG 134

  Fly   137 IRDCRDGDDELESLCEGVTIPTTTVSSTTSTTTESSI 173
            ..:|:|..|| || ||....|.   |.....|:|:.:
  Rat   135 QNNCQDNSDE-ES-CESSLEPG---SGQVFVTSENQL 166

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
CG6553	NP_610911.1	LDLa	34..60	CDD:197566	10/25 (40%)
		LDLa	70..101	CDD:197566	13/31 (42%)
		LDLa	115..146	CDD:197566	10/30 (33%)
Ldlrad3	NP_001388799.1	LDLa	32..64	CDD:238060	12/31 (39%)
		LDLa	71..106	CDD:238060	15/36 (42%)
		LDLa	113..147	CDD:238060	14/35 (40%)