Protein Alignment CG6553 and Lrp12

DIOPT Version :10

• Sequence 1: NP_610911.1
• Gene: CG6553 / 36537
• FlyBaseID: FBgn0033880
• Length: 319
• Species: Drosophila melanogaster
• Sequence 2: NP_001128355.1
• Gene: Lrp12 / 314941
• RGDID: 1304943
• Length: 858
• Species: Rattus norvegicus
• Alignment Length: 265
• Identity: 63/265 - (23%)
• Similarity: 106/265 - (40%)
• Gaps: 56/265 - (21%)

  Fly    36 CGGG-DCIQLDQLCDGSANCLDGSDE-TVAMCEKVWCPGYAFRCS-YGACIASTAVCDGVQDCVD 97
            |||. .|....|.|||..:|.:|.|| ...||:|     ..|.|| .|.|...:..|:....|.:
  Rat   382 CGGNWGCYTEQQRCDGYWHCPNGRDEINCTMCQK-----EEFPCSRNGVCYPRSDRCNYQNHCPN 441

  Fly    98 GSDEQGWLCRAQMQQANCDNWEMYCSSGQCMTYSKLCDGIRDCRDGDDELESLCEGVTIPTTTVS 162
            ||||:....        |.....:|.:.:|:..|.:||...||.||.|| || |. |.:||..::
  Rat   442 GSDEKNCFF--------CQPGNFHCKNNRCVFESWVCDSQDDCGDGSDE-ES-CP-VIVPTRVIT 495

  Fly   163 STT---------------------------STTTESSIHRITPTVPVTRKASRPNPLQENGECVV 200
            :..                           ..:.|:.:.|:  ...:.|:.:.|:..|...:.::
  Rat   496 AAVIGSLVCGLLLVIALGCTCKLYSLRMFERRSFETQLSRV--EAELLRREAPPSYGQLIAQGLI 558

  Fly   201 PQLPNVMVKHFTDAILTVGSRVANGTRIYYDCPA-EHRLKGENQNICQDALWARKFPYCETPQAY 264
            |.:.:..|.....|.:....|:|..:::.:  |: ...:.|.::||     |.|.|.:..:..:.
  Rat   559 PPVEDFPVCSPNQASVLENLRLAVRSQLGF--PSIRLPMTGRSRNI-----WNRIFNFARSRHSG 616

  Fly   265 VFSLV 269
            ..:||
  Rat   617 SLALV 621

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
CG6553	NP_610911.1	LDLa	34..60	CDD:197566	10/24 (42%)
		LDLa	70..101	CDD:197566	9/31 (29%)
		LDLa	115..146	CDD:197566	10/30 (33%)
Lrp12	NP_001128355.1	CUB	47..158	CDD:238001
		LDLa	166..200	CDD:238060
		LDLa	215..254	CDD:238060
		CUB	267..371	CDD:238001
		LDLa	413..448	CDD:238060	13/39 (33%)
		LDLa	451..485	CDD:238060	14/35 (40%)