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Protein Alignment CG6553 and Sorl1

DIOPT Version :10

Sequence 1:	NP_610911.1	Gene:	CG6553 / 36537	FlyBaseID:	FBgn0033880	Length:	319	Species:	Drosophila melanogaster
Sequence 2:	NP_035566.2	Gene:	Sorl1 / 20660	MGIID:	1202296	Length:	2215	Species:	Mus musculus

Alignment Length:	284	Identity:	79/284 - (27%)
Similarity:	105/284 - (36%)	Gaps:	86/284 - (30%)

- Green bases have known domain annotations that are detailed below.

  Fly    28 NATSCGH-------RCGGGDCIQLDQLCDGSANCLDGSDETVAMCEKVWCPGYAFRCSYGACIAS 85
            |.|:..|       :|..|.||.....|||.|:|.|||||....|||. |.|  |.|..|.||.|
Mouse  1191 NCTAIYHTCEASNFQCHNGHCIPQRWACDGDADCQDGSDEDPVSCEKK-CNG--FHCPNGTCIPS 1252

  Fly    86 TAVCDGVQDCVDGSDEQ----------GWLCRAQMQ----------------------------- 111
            :..|||::||.||||||          .::|:.:.|
Mouse  1253 SKHCDGLRDCPDGSDEQHCEPFCTRFMDFVCKNRQQCLFHSMVCDGIVQCRDGSDEDAAFAGCSQ 1317

  Fly   112 ----QANCDNWEMYCSSGQCMTYSKLCDGIRDCRDGDDELESLCEGVTIPTTTVSSTTSTTTESS 172
                ...||.:...|.:|.|::....|||:.||.|..||..  ||..| .....|.......|:.
Mouse  1318 DPEFHKECDEFGFQCQNGVCISLIWKCDGMDDCGDYSDEAN--CENPT-EAPNCSRYFQFHCENG 1379

  Fly   173 IHRITPTVPVTRKASRPNPL---QENGEC----VVPQ--------LPNVMVKHFTDAILTVGSRV 222
             |    .:|...|..|.|..   .:..:|    |:|.        |||..  |.:.....:|:.|
Mouse  1380 -H----CIPNRWKCDRENDCGDWSDEKDCGDSHVLPSPTPGPSTCLPNYF--HCSSGACVMGTWV 1437

  Fly   223 ANGTRIYYDCPAEHRLKGENQNIC 246
            .:|   |.||     ..|.::..|
Mouse  1438 CDG---YRDC-----ADGSDEEAC 1453

Known Domains:

Indicated by green bases in alignment.

Software error:

Illegal division by zero at /www/www.flyrnai.org/docroot/cgi-bin/DRSC_prot_align.pl line 592.

For help, please send mail to the webmaster (ritg@hms.harvard.edu), giving this error message and the time and date of the error.