DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG6553 and egg-2

DIOPT Version :10

Sequence 1:NP_610911.1 Gene:CG6553 / 36537 FlyBaseID:FBgn0033880 Length:319 Species:Drosophila melanogaster
Sequence 2:NP_498537.1 Gene:egg-2 / 187510 WormBaseID:WBGene00019811 Length:548 Species:Caenorhabditis elegans


Alignment Length:208 Identity:59/208 - (28%)
Similarity:82/208 - (39%) Gaps:78/208 - (37%)


- Green bases have known domain annotations that are detailed below.


  Fly    20 VTICLGSQNATSC------GHRCGGGDCIQLDQLCDGSANCLDGSDETVAMCEKVWCPG-YAFRC 77
            |:.|....:.::|      .|:| |.:||:..::|||..:|.|||||  ..|:...|.| ....|
 Worm   239 VSDCENESDESNCNKCQKGAHKC-GKNCIKASKVCDGIPDCDDGSDE--HQCDCKTCSGSEKALC 300

  Fly    78 SYGACIASTAVCDGVQDCVDGSDEQGWLC---------RAQMQQANCDNWEMY-----CSS---- 124
            ..|.||..:.||||..||:||.||:.  |         .::::...||:...|     ||.    
 Worm   301 EDGTCIMRSQVCDGKHDCLDGIDEEN--CPGSCSNERFSSKLKLLTCDDGNQYSEVEACSGLVEA 363

  Fly   125 -----------------------GQCMTYSKLCDGIRDCRDGDDE-------------------- 146
                                   .:|:..||:||||.||.||.||                    
 Worm   364 CELNCPKCDPKHTFTCPAVGGIHNKCIKRSKVCDGIFDCEDGADEKKCTPVKECVVESSIQFTCD 428

  Fly   147 ---LES--LCEGV 154
               |||  .|:||
 Worm   429 NKCLESSRRCDGV 441

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG6553NP_610911.1 LDLa 34..60 CDD:197566 12/25 (48%)
LDLa 70..101 CDD:197566 14/31 (45%)
LDLa 115..146 CDD:197566 16/62 (26%)
egg-2NP_498537.1 LDLa 123..159 CDD:238060
LDLa 216..251 CDD:238060 2/11 (18%)
LDLa 254..287 CDD:238060 14/35 (40%)
LDLa 300..327 CDD:238060 14/28 (50%)
LDLa 373..411 CDD:238060 13/37 (35%)
LDLa 424..453 CDD:238060 6/18 (33%)
LDLa 456..491 CDD:238060
Blue background indicates that the domain is not in the aligned region.

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