DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Echs1 and ECHIA

DIOPT Version :10

Sequence 1:NP_610910.1 Gene:Echs1 / 36536 FlyBaseID:FBgn0033879 Length:295 Species:Drosophila melanogaster
Sequence 2:NP_193356.2 Gene:ECHIA / 827314 AraportID:AT4G16210 Length:265 Species:Arabidopsis thaliana


Alignment Length:266 Identity:84/266 - (31%)
Similarity:140/266 - (52%) Gaps:17/266 - (6%)


- Green bases have known domain annotations that are detailed below.


  Fly    33 STNNNWEYIKTEVAGEGKNVGVITLNRPKALNALCNGLMKELSTALQQFSKDKTISAIVLTGSEK 97
            :.:.|...:|.|..|    :.|||:||||:||:|...:|.:|:.|.:....|:::..::.|||.:
plant     4 TVSENLIQVKKESGG----IAVITINRPKSLNSLTRAMMVDLAKAFKDMDSDESVQVVIFTGSGR 64

  Fly    98 AFAAGADIKEMVGNTYSQCI-QGNFLNDWT----EVARTQKPIIAAVNGYALGGGCELAMMCDII 157
            :|.:|.|:      |.::.: :|:..:..|    ::.|.:||||.|:||:|:..|.|||:.|||:
plant    65 SFCSGVDL------TAAESVFKGDVKDPETDPVVQMERLRKPIIGAINGFAITAGFELALACDIL 123

  Fly   158 YAGDKAKFGQPEIALGTIPGAGGTQRLTRVVGKSKAMEMCLTGNMIGAQEAEKLGLASKVVPADQ 222
            .|...|||.......|..|..|.:|:|:|::|.:||.|:.||...:.|..|.|||..:.||...:
plant   124 VASRGAKFMDTHARFGIFPSWGLSQKLSRIIGANKAREVSLTSMPLTADVAGKLGFVNHVVEEGE 188

  Fly   223 LLGEAVKLGEKIGTHSNLIVQLCKEAVNTAYETTLQEGLKFERRTFHATFS--TADRKEGMTAFA 285
            .|.:|.::.|.|..:...:|...|..:|...:..|...|..|:...||.:|  |.::...|..|.
plant   189 ALKKAREIAEAIIKNEQGMVLRIKSVINDGLKLDLGHALTLEKERAHAYYSGMTKEQFRKMQEFI 253

  Fly   286 EKRPAK 291
            ..|.:|
plant   254 AGRGSK 259

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Echs1NP_610910.1 crotonase-like 37..294 CDD:474030 84/262 (32%)
ECHIANP_193356.2 PLN02888 1..262 CDD:215480 84/266 (32%)

Return to query results.
Submit another query.