DRSC/TRiP Functional Genomics Resources

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Protein Alignment Echs1 and hadhaa

DIOPT Version :9

Sequence 1:NP_610910.1 Gene:Echs1 / 36536 FlyBaseID:FBgn0033879 Length:295 Species:Drosophila melanogaster
Sequence 2:NP_001098746.1 Gene:hadhaa / 553401 ZFINID:ZDB-GENE-031222-5 Length:761 Species:Danio rerio


Alignment Length:252 Identity:82/252 - (32%)
Similarity:128/252 - (50%) Gaps:37/252 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly    42 KTEVAGEGK-NVGVITLNRPKA-LNALCNGLMKELSTALQQFSKDKTI-SAIVLTGSEKAFAAGA 103
            :|.|:.|.| ||.|:.:|.|.: :|.|...:..|:...:.:...:.:: ||::::.....|.|||
Zfish    36 RTHVSYEVKDNVAVVRINDPTSKVNTLSKHMQAEMVEVMNEVWGNSSVKSAVLISRKPGCFIAGA 100

  Fly   104 DIKEMVGNT-------YSQCIQGNFLNDWTEVARTQKPIIAAVNGYALGGGCELAMMCD--IIYA 159
            ||..:...|       .||..|..|    .::.::..||:||:||..||||.|.|:.|.  |...
Zfish   101 DINMIQACTTAEEVTSLSQAGQKMF----EQIEKSPIPIVAAINGSCLGGGLEFAIACQYRIATK 161

  Fly   160 GDKAKFGQPEIALGTIPGAGGTQRLTRVVGKSKAMEMCLTGNMIGAQEAEKLGLASKVVPADQLL 224
            ..|...|.||:.||.:|||||||||.::||...|.:|.|||..|.|.:|:|:||..::|..   |
Zfish   162 SKKTVLGTPEVMLGLLPGAGGTQRLPKMVGLPAAFDMMLTGRNIRADKAKKMGLVHQLVDP---L 223

  Fly   225 GEAVKLGEKIGTHSNLIVQLCKEAVNTAYETTLQEGLKFERRTFHATFSTADRKEGM 281
            |..:|..|:     ..|..|.:.||:.|      :||..::       .|.::|:|:
Zfish   224 GPGLKSPEE-----RTIEYLEEVAVDFA------KGLAAKK-------VTLEKKKGL 262

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Echs1NP_610910.1 crotonase-like 37..294 CDD:304874 82/252 (33%)
hadhaaNP_001098746.1 fa_ox_alpha_mit 25..760 CDD:131494 82/252 (33%)
crotonase-like 39..249 CDD:119339 76/227 (33%)
3HCDH_N 361..539 CDD:280833
3HCDH 542..637 CDD:279114
3HCDH 674..>750 CDD:279114
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG1024
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
32.810

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