DRSC/TRiP Functional Genomics Resources

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Protein Alignment Echs1 and Echdc1

DIOPT Version :10

Sequence 1:NP_610910.1 Gene:Echs1 / 36536 FlyBaseID:FBgn0033879 Length:295 Species:Drosophila melanogaster
Sequence 2:XP_006227808.3 Gene:Echdc1 / 361465 RGDID:1359654 Length:466 Species:Rattus norvegicus


Alignment Length:230 Identity:62/230 - (26%)
Similarity:119/230 - (51%) Gaps:26/230 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly    52 VGVITLNRPKALNALCNGLMKEL---STALQQFSKDKTISAIVLTGSEKAFAAGADIKEMV---- 109
            :|::|||....:||....:|.:|   ...|:.:::.|   .:::.|::..|.:|:|:..:.    
  Rat   223 IGILTLNNSNKMNAFSGAMMLQLLERVIELENWTEGK---GLIVHGAKNTFCSGSDLNAVKALST 284

  Fly   110 ---GNTYSQCIQGNFLNDWTEVARTQKPIIAAVNGYALGGGCELAMMCDIIYAGDKA--KFGQPE 169
               |...|..:|    |..|...|.....:|.|.|:|:|||.||...||.....:::  :|...|
  Rat   285 PENGVALSMFMQ----NTLTRFMRLPLISVALVQGWAMGGGAELTTACDFRLMTEESVIRFVHKE 345

  Fly   170 IALGTIPGAGGTQRLTRVVGKSKAMEMCLTGNM-IGAQEAEKLGLASKVV-PADQ--LLGEAVKL 230
              :|.:|..||..||..::|..:|::: |:|.. :.::||.::|||.:|: |:|:  .|.:|.:.
  Rat   346 --MGIVPSWGGASRLVEIIGSRQALKV-LSGTFKLDSKEALRIGLADEVLQPSDEATALEQAQEW 407

  Fly   231 GEKIGTHSNLIVQLCKEAVNTAYETTLQEGLKFER 265
            .|:..:....:::..|::|.:..|..|:|.|:.||
  Rat   408 LEQFVSGPAQVIRGLKKSVCSGRELYLEEALQNER 442

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Echs1NP_610910.1 crotonase-like 37..294 CDD:474030 62/230 (27%)
Echdc1XP_006227808.3 None

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