DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Echs1 and Cdyl

DIOPT Version :10

Sequence 1:NP_610910.1 Gene:Echs1 / 36536 FlyBaseID:FBgn0033879 Length:295 Species:Drosophila melanogaster
Sequence 2:XP_017456089.1 Gene:Cdyl / 361237 RGDID:1549745 Length:617 Species:Rattus norvegicus


Alignment Length:275 Identity:65/275 - (23%)
Similarity:125/275 - (45%) Gaps:15/275 - (5%)


- Green bases have known domain annotations that are detailed below.


  Fly    28 RFSSSSTNNNWEYIKTEVAGEGKNVGVITLNRPKALNALCNGLMKELSTALQQFSKDKTISAIVL 92
            |||...|.:.:.|....|..:.....::...:....|:|...:|||:.:||...:.|.: ..::|
  Rat   348 RFSVRQTESAYRYRDIVVRKQDGFTHILLSTKSSENNSLNPEVMKEVQSALSTAAADDS-KLVLL 411

  Fly    93 TGSEKAFAAGADI----------KEMVGNTYSQCIQGNFLNDWTEVARTQKPIIAAVNGYALGGG 147
            :.....|..|.|.          ::......::.|: ||:|.:.:.   :||||.||||.|:|.|
  Rat   412 SAVGSVFCCGLDFIYFIRRLTDDRKRESTKMAEAIR-NFVNTFIQF---KKPIIVAVNGPAIGLG 472

  Fly   148 CELAMMCDIIYAGDKAKFGQPEIALGTIPGAGGTQRLTRVVGKSKAMEMCLTGNMIGAQEAEKLG 212
            ..:..:||:::|.:||.|..|....|..|....|....:::|.:.|.||.|:|..:.||||...|
  Rat   473 ASILPLCDVVWANEKAWFQTPYTTFGQSPDGCSTVMFPKIMGGASANEMLLSGRKLTAQEACGKG 537

  Fly   213 LASKVVPADQLLGEAVKLGEKIGTHSNLIVQLCKEAVNTAYETTLQEGLKFERRTFHATFSTADR 277
            |.|:|........|.:...:::.:.:.::::..|..|....:..|::..:.|.......:.:|..
  Rat   538 LVSQVFWPGTFTQEVMVRIKELASCNPIVLEESKALVRCNMKMELEQANERECDALKKIWGSAQG 602

  Fly   278 KEGMTAFAEKRPAKF 292
            .:.|..:.:::..:|
  Rat   603 MDSMLKYLQRKIDEF 617

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Echs1NP_610910.1 crotonase-like 37..294 CDD:474030 61/266 (23%)
CdylXP_017456089.1 CD_CDY 56..105 CDD:349284
crotonase-like 363..559 CDD:119339 53/200 (27%)
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.