DRSC/TRiP Functional Genomics Resources

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Protein Alignment Echs1 and Hibch

DIOPT Version :9

Sequence 1:NP_610910.1 Gene:Echs1 / 36536 FlyBaseID:FBgn0033879 Length:295 Species:Drosophila melanogaster
Sequence 2:XP_006244957.1 Gene:Hibch / 301384 RGDID:1308392 Length:385 Species:Rattus norvegicus


Alignment Length:353 Identity:87/353 - (24%)
Similarity:139/353 - (39%) Gaps:95/353 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly     8 FAS--RAQCVLQAAARQPQVATRFSSSSTNNNWEYIKTEVAGEGKN-VGVITLNRPKALNALCNG 69
            |:|  ||..:||.........|               .||..|.:. .|||||||||.||||...
  Rat    13 FSSIRRASVILQHLRMSKHTET---------------AEVLLERRGCAGVITLNRPKLLNALSLN 62

  Fly    70 LMKELSTALQQFSKDKTISAIVLTGS-EKAFAAGADIKEM-----VGNTYSQCI--QGNFLNDWT 126
            :::::...|:::.:|.....|::.|: .|||.||.|||.:     .|.|.||.:  :...||:  
  Rat    63 MIRQIYPQLKKWERDPDTFLIIIKGAGGKAFCAGGDIKALSEAKKAGQTLSQDLFREEYILNN-- 125

  Fly   127 EVARTQKPIIAAVNGYALGGGCELAMMCDIIYAGDKAKFGQPEIALGTIPGAGGTQRLTRVVGKS 191
            .:|..|||.:|.::|..:|||..|::......|.:::.|..||..:|..|..||...|.|:.|| 
  Rat   126 AIASCQKPYVALIDGITMGGGVGLSVHGQFRVATERSLFAMPETGIGLFPDVGGGYFLPRLQGK- 189

  Fly   192 KAMEMCLTGNMIGAQEAEKLGLASKVVPADQL--------------------LGEAVKLGEKIGT 236
            ....:.|||..:..::..:.|:|:..|.:::|                    :.|:.....|:|.
  Rat   190 LGYFLALTGFRLKGRDVHRAGIATHFVDSEKLHVLEEELLALKSPSAEDVAGVLESYHAKSKMGQ 254

  Fly   237 HSNLIVQLCKEAVNTAYET---------------------------------------------- 255
            ..::|.:...:.:|:.:..                                              
  Rat   255 DKSIIFEEHMDKINSCFSANTVEQILENLRQDGSPFAMEQIKVINKMSPTSLKITLRQLMEGSTK 319

  Fly   256 TLQEGLKFERRTFHATFSTADRKEGMTA 283
            ||||.|..|.|...|.....|..||:.|
  Rat   320 TLQEVLTMEYRLTQACMEGHDFHEGVRA 347

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Echs1NP_610910.1 crotonase-like 37..294 CDD:304874 80/322 (25%)
HibchXP_006244957.1 PRK05617 33..377 CDD:235533 81/333 (24%)
ECH_2 46..374 CDD:292731 77/305 (25%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG1024
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
32.810

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