DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Syngr and SYNGR1

DIOPT Version :9

Sequence 1:NP_610908.1 Gene:Syngr / 36533 FlyBaseID:FBgn0033876 Length:241 Species:Drosophila melanogaster
Sequence 2:NP_004702.2 Gene:SYNGR1 / 9145 HGNCID:11498 Length:233 Species:Homo sapiens


Alignment Length:237 Identity:96/237 - (40%)
Similarity:133/237 - (56%) Gaps:32/237 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly    13 GGAYGGGKAGGAFDPLTFAMKPQVVIRALCWLFSVVVFGCISSEGW--TEKDGKEYCLYNGDGMA 75
            |||||.|||||||||.|...:|..::|.:.||||:||||.|.:||:  :..:|:|:|:||.:..|
Human     3 GGAYGAGKAGGAFDPYTLVRQPHTILRVVSWLFSIVVFGSIVNEGYLNSASEGEEFCIYNRNPNA 67

  Fly    76 CKYGNMVGVFGFLASMGFMGGEFLFERMSSVKSRKRYVMADMGFSALWTFMYFVAFLYLWSQWSS 140
            |.||..|||..||..:.::..:..|.::||||.||:.|::|:|.||.|.|::||.|.||.:||..
Human    68 CSYGVAVGVLAFLTCLLYLALDVYFPQISSVKDRKKAVLSDIGVSAFWAFLWFVGFCYLANQWQV 132

  Fly   141 SAPP--PLGIGAGSMKTAIWFCLFSIVSWALCALMAYKRFLIGAGDEFTSAFETDPANVVHQQAY 203
            |.|.  ||..|..:.:.||.|..|||.:||..|::|::|:.|||.....|....||:        
Human   133 SKPKDNPLNEGTDAARAAIAFSFFSIFTWAGQAVLAFQRYQIGADSALFSQDYMDPS-------- 189

  Fly   204 GYSMDNDNDQYSASPFGQ------PQQGGMEQQQSGMEYQQP 239
                     |.|:.|:..      |...||     |..||||
Human   190 ---------QDSSMPYAPYVEPTGPDPAGM-----GGTYQQP 217

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SyngrNP_610908.1 MARVEL 34..169 CDD:307448 60/138 (43%)
SYNGR1NP_004702.2 MARVEL 21..167 CDD:279608 62/145 (43%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 194..233 9/29 (31%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C165157821
Domainoid 1 1.000 127 1.000 Domainoid score I5355
eggNOG 1 0.900 - - E1_KOG4016
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H3456
Inparanoid 1 1.050 173 1.000 Inparanoid score I4079
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG45451
OrthoDB 1 1.010 - - D1549362at2759
OrthoFinder 1 1.000 - - FOG0001420
OrthoInspector 1 1.000 - - otm40745
orthoMCL 1 0.900 - - OOG6_104437
Panther 1 1.100 - - O PTHR10838
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R2805
SonicParanoid 1 1.000 - - X989
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
User_Submission 00.000 Not matched by this tool.
1615.800

Return to query results.
Submit another query.