DRSC/TRiP Functional Genomics Resources

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Protein Alignment Syngr and SYNGR3

DIOPT Version :9

Sequence 1:NP_610908.1 Gene:Syngr / 36533 FlyBaseID:FBgn0033876 Length:241 Species:Drosophila melanogaster
Sequence 2:NP_004200.2 Gene:SYNGR3 / 9143 HGNCID:11501 Length:229 Species:Homo sapiens


Alignment Length:236 Identity:89/236 - (37%)
Similarity:138/236 - (58%) Gaps:16/236 - (6%)


- Green bases have known domain annotations that are detailed below.


  Fly    13 GGAYGGGKAGGAFDPLTFAMKPQVVIRALCWLFSVVVFGCISSEGWTEKD-GKEY-CLYNGDGMA 75
            |.::|.|:||.|.||::||.:||.::|...|:||:.|||.|.:||:...| |.|. |::||:..|
Human     3 GASFGAGRAGAALDPVSFARRPQTLLRVASWVFSIAVFGPIVNEGYVNTDSGPELRCVFNGNAGA 67

  Fly    76 CKYGNMVGVFGFLASMGFMGGEFLFERMSSVKSRKRYVMADMGFSALWTFMYFVAFLYLWSQWSS 140
            |::|..:|:..|||...|:..:..|:::|||:.|:|.|:.|:|||.||:|::||.|.:|.:||..
Human    68 CRFGVALGLGAFLACAAFLLLDVRFQQISSVRDRRRAVLLDLGFSGLWSFLWFVGFCFLTNQWQR 132

  Fly   141 SAPPPLGIGAG-SMKTAIWFCLFSIVSWALCALMAYKRFLIGAGDEFTSAFETDPANVVHQQAY- 203
            :||.|....|| :.:.||.|..|||:||....:.|.:||.:|..   .|.|.|:..:....||| 
Human   133 TAPGPATTQAGDAARAAIAFSFFSILSWVALTVKALQRFRLGTD---MSLFATEQLSTGASQAYP 194

  Fly   204 GYSMDN---DNDQYSASPFGQPQQGGMEQQQSGMEYQQPTY 241
            ||.:.:   ..:.|.:.||.:.    ::....|  ||.|.|
Human   195 GYPVGSGVEGTETYQSPPFTET----LDTSPKG--YQVPAY 229

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SyngrNP_610908.1 MARVEL 34..169 CDD:307448 59/137 (43%)
SYNGR3NP_004200.2 MARVEL 20..165 CDD:366555 61/144 (42%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 209..229 6/25 (24%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C165157818
Domainoid 1 1.000 127 1.000 Domainoid score I5355
eggNOG 1 0.900 - - E1_KOG4016
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 173 1.000 Inparanoid score I4079
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG45451
OrthoDB 1 1.010 - - D1549362at2759
OrthoFinder 1 1.000 - - FOG0001420
OrthoInspector 1 1.000 - - otm40745
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR10838
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R2805
SonicParanoid 1 1.000 - - X989
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
User_Submission 00.000 Not matched by this tool.
1413.900

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