Protein Alignment Syngr and Syngr3

DIOPT Version :10

• Sequence 1: NP_610908.1
• Gene: Syngr / 36533
• FlyBaseID: FBgn0033876
• Length: 241
• Species: Drosophila melanogaster
• Sequence 2: NP_001100455.2
• Gene: Syngr3 / 302975
• RGDID: 1311801
• Length: 229
• Species: Rattus norvegicus
• Alignment Length: 236
• Identity: 89/236 - (37%)
• Similarity: 141/236 - (59%)
• Gaps: 16/236 - (6%)

  Fly    13 GGAYGGGKAGGAFDPLTFAMKPQVVIRALCWLFSVVVFGCISSEGWTEKD-GKEY-CLYNGDGMA 75
            |.::|.|:||.||||::||.:||.::|.:.|:||:.|||.|.:||:...| |.|. |::||:..|
  Rat     3 GASFGAGRAGAAFDPVSFAQRPQTLLRVVSWVFSIAVFGPIVNEGYVNSDSGPELRCVFNGNAGA 67

  Fly    76 CKYGNMVGVFGFLASMGFMGGEFLFERMSSVKSRKRYVMADMGFSALWTFMYFVAFLYLWSQWSS 140
            |::|.::|:..|:|.:.|:..:..|:::|||:.|:|.|:.|:|||.:|:|::||.|.:|.:||..
  Rat    68 CRFGVVLGLGAFIACVAFLLLDVRFQQISSVRDRRRAVLLDLGFSGVWSFLWFVGFCFLTNQWQR 132

  Fly   141 SAPPPLGIGAG-SMKTAIWFCLFSIVSWALCALMAYKRFLIGAGDEFTSAFETDPANVVHQQAY- 203
            :||.|....|| :.:.||.|..|||:||....:.|.:||.:|..   .|.|.||.......|||
  Rat   133 TAPGPGTAQAGDAARAAIAFSFFSILSWVALTVKALQRFRLGTD---MSLFATDQLGTGAAQAYP 194

  Fly   204 GYSMDN---DNDQYSASPFGQPQQGGMEQQQSGMEYQQPTY 241
            ||.:.:   ..:.|.:.||.:.    ::....|  ||.|.|
  Rat   195 GYPVGSGVEGTETYQSPPFTET----LDTSPKG--YQVPAY 229

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Syngr	NP_610908.1	MARVEL	34..169	CDD:366555	57/137 (42%)
Syngr3	NP_001100455.2	MARVEL	23..165	CDD:366555	57/141 (40%)