DRSC/TRiP Functional Genomics Resources

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Protein Alignment Syngr and Syngr1

DIOPT Version :9

Sequence 1:NP_610908.1 Gene:Syngr / 36533 FlyBaseID:FBgn0033876 Length:241 Species:Drosophila melanogaster
Sequence 2:NP_997591.1 Gene:Syngr1 / 20972 MGIID:1328323 Length:234 Species:Mus musculus


Alignment Length:235 Identity:91/235 - (38%)
Similarity:131/235 - (55%) Gaps:27/235 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly    13 GGAYGGGKAGGAFDPLTFAMKPQVVIRALCWLFSVVVFGCISSEGW--TEKDGKEYCLYNGDGMA 75
            |||||.|||||||||.|...:|..::|.:.|:||:||||.|.:||:  ..::.:|:|:||.:..|
Mouse     3 GGAYGAGKAGGAFDPYTLVRQPHTILRVVSWVFSIVVFGSIVNEGYLNNPEEEEEFCIYNRNPNA 67

  Fly    76 CKYGNMVGVFGFLASMGFMGGEFLFERMSSVKSRKRYVMADMGFSALWTFMYFVAFLYLWSQWSS 140
            |.||..|||..||..:.::..:..|.::||||.||:.|::|:|.||.|.|.:||.|.:|.:||..
Mouse    68 CSYGVTVGVLAFLTCLLYLALDVYFPQISSVKDRKKAVLSDIGVSAFWAFFWFVGFCFLANQWQV 132

  Fly   141 SAPP--PLGIGAGSMKTAIWFCLFSIVSWALCALMAYKRFLIGAGDEFTSAFETDPANVVHQQAY 203
            |.|.  ||..|..:.:.||.|..|||.:||..|::|::|:.|||.....|....||         
Mouse   133 SKPKDNPLNEGTDAARAAIAFSFFSIFTWAGQAVLAFQRYQIGADSALFSQDYMDP--------- 188

  Fly   204 GYSMDNDNDQYSASPFGQPQQG----GMEQQQSGMEYQQP 239
                 :.:.....:|:.:|..|    ||     |..||.|
Mouse   189 -----SQDSSMPYAPYVEPSAGSDPAGM-----GGTYQHP 218

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SyngrNP_610908.1 MARVEL 34..169 CDD:307448 57/138 (41%)
Syngr1NP_997591.1 MARVEL 21..167 CDD:366555 59/145 (41%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 201..234 8/23 (35%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C167848208
Domainoid 1 1.000 121 1.000 Domainoid score I5675
eggNOG 1 0.900 - - E1_KOG4016
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H3456
Inparanoid 1 1.050 166 1.000 Inparanoid score I4169
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG45451
OrthoDB 1 1.010 - - D1549362at2759
OrthoFinder 1 1.000 - - FOG0001420
OrthoInspector 1 1.000 - - otm42818
orthoMCL 1 0.900 - - OOG6_104437
Panther 1 1.100 - - O PTHR10838
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R2805
SonicParanoid 1 1.000 - - X989
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
1615.800

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