DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG6347 and Ctsm

DIOPT Version :9

Sequence 1:NP_610906.1 Gene:CG6347 / 36531 FlyBaseID:FBgn0033874 Length:352 Species:Drosophila melanogaster
Sequence 2:NP_852043.2 Gene:Ctsm / 306720 RGDID:631420 Length:333 Species:Rattus norvegicus


Alignment Length:313 Identity:109/313 - (34%)
Similarity:161/313 - (51%) Gaps:28/313 - (8%)


- Green bases have known domain annotations that are detailed below.


  Fly    47 KVYSDEERVYRESIFAAKMSLITLSNKNADNGVSGFRLGVNTLADMTRKEIATLLGSKISEFGER 111
            |.||.||...:.:::...|..|.|.|.....|..||.:.:|...|||           |.||.:.
  Rat    38 KTYSLEEEGQKRAVWEENMKKIKLHNGENGLGKHGFTMEMNAFGDMT-----------IEEFRKL 91

  Fly   112 YTNGHINFVTARNPA----SANLPEMFDWREKGGVTPPGFQGVGCGACWSFATTGALEGHLFRRT 172
            .....|..|...|..    :.|:|...:||::|.|||...|| .|..||:|:..||:||.:|::|
  Rat    92 MIEIPIPTVKKENSVQKRQAVNVPNFINWRKRGYVTPVRRQG-RCNVCWAFSVAGAIEGQMFQKT 155

  Fly   173 GVLASLSQQNLVDCADDYGNMGCDGGFQEYGFEYIRDH-GVTLANKYPYTQTEMQCRQNETAGRP 236
            |.|..||.||||||:...||:||..|......:|:::: |:.....|||.:.|..||.:      
  Rat   156 GQLIPLSVQNLVDCSRPQGNLGCYLGNTYLALQYVKENGGLESEATYPYEEKEGSCRYH------ 214

  Fly   237 PRESLVKIRDYATITPGDEEKMKEVIATLGPLACSMNADTISFEQYSGGIYEDEECNQGELNHSV 301
            |..|...|.|:..: |.:|:.:...:|||||::.:::|...||..|..|||.:..|:...:.|::
  Rat   215 PDNSTASITDFEFV-PKNEDALMNAVATLGPISVAIDARHESFLFYRNGIYHEPNCSSSVVTHAM 278

  Fly   302 TVVGYG----TENGRDYWIIKNSYSQNWGEGGFMRILRNAGGFCGIASECSYP 350
            .:||||    ..:||.|||:|||....||..|:|:|.::.|..||||:...||
  Rat   279 LLVGYGFVGEESDGRKYWILKNSMGNKWGNRGYMKIAKDQGNHCGIATYALYP 331

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG6347NP_610906.1 Inhibitor_I29 38..97 CDD:285458 16/49 (33%)
Peptidase_C1A 131..350 CDD:239068 84/223 (38%)
CtsmNP_852043.2 Inhibitor_I29 29..87 CDD:214853 17/59 (29%)
Peptidase_C1A 115..331 CDD:239068 84/223 (38%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG4870
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG53545
OrthoDB 1 1.010 - - D1275401at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
54.830

Return to query results.
Submit another query.