DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG6347 and Ctla2b

DIOPT Version :9

Sequence 1:NP_610906.1 Gene:CG6347 / 36531 FlyBaseID:FBgn0033874 Length:352 Species:Drosophila melanogaster
Sequence 2:NP_031823.1 Gene:Ctla2b / 13025 MGIID:88555 Length:113 Species:Mus musculus


Alignment Length:100 Identity:27/100 - (27%)
Similarity:43/100 - (43%) Gaps:19/100 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly    47 KVYS-DEERVYRESIFAAKMSLITLSNKNADNGVSGFRLGVNTLADMTRKEIAT-LLGSKISEFG 109
            |.|| |||| :|..::......|...|.:.:.|.:.|.:|:|..:|:|.:|..| ..||.:    
Mouse    25 KAYSLDEER-HRRLMWEENKKKIEAHNADYERGKTSFYMGLNQFSDLTPEEFRTNCCGSSM---- 84

  Fly   110 ERYTNGHINFVTARNPASANLPEMFDWREKGGVTP 144
                        .|...:.:|||..|..:...:||
Mouse    85 ------------CRGEMAPDLPEYEDLGKNSYLTP 107

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG6347NP_610906.1 Inhibitor_I29 38..97 CDD:285458 16/50 (32%)
Peptidase_C1A 131..350 CDD:239068 4/13 (31%)
Ctla2bNP_031823.1 2 X 3 AA tandem repeats of E-W-K 15..20
Inhibitor_I29 16..74 CDD:214853 16/49 (33%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG4870
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.810

Return to query results.
Submit another query.