DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment fl(2)d and Wtap

DIOPT Version :9

Sequence 1:NP_523732.2 Gene:fl(2)d / 36527 FlyBaseID:FBgn0000662 Length:536 Species:Drosophila melanogaster
Sequence 2:NP_001107014.1 Gene:Wtap / 499020 RGDID:1563824 Length:395 Species:Rattus norvegicus


Alignment Length:403 Identity:143/403 - (35%)
Similarity:209/403 - (51%) Gaps:66/403 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly   110 LLEDEIENLKLEQVRMAQQCADAQRREKILMRRLANKEQEFQDYVSQIAEYKAQQAPTALALRTA 174
            |..:::..|:..:.::.||..::.|||.||:.|||.||||.|:..:||...|..|.|:...||:.
  Rat    47 LNSNDVTGLRESEEKLKQQQQESARRENILVMRLATKEQEMQECTTQIQYLKQVQQPSVAQLRST 111

  Fly   175 LLDPAVNLLFERLKKELKATKAKLEETQNELSAWKFTPDSNTGKRLMAKCRLLYQENEELGKMTS 239
            ::|||:||.|.::|.||:.||.|||:.|||||||||||||.|||:||||||:|.|||:|||:..|
  Rat   112 MVDPAINLFFLKMKGELEQTKDKLEQAQNELSAWKFTPDSQTGKKLMAKCRMLIQENQELGRQLS 176

  Fly   240 NGRLAKLETELAMQKSFSEEVKKSQSELDDFLQELDEDVEGMQSTILFLQQELKTTRDRIQTLEK 304
            .||:|:||.|||:||.:|||:|.||.||:||:.:|||:|||||||||.|||:||.||.::...::
  Rat   177 QGRIAQLEAELALQKKYSEELKSSQDELNDFIIQLDEEVEGMQSTILVLQQQLKETRQQLAQYQQ 241

  Fly   305 ENAQLKQAIKDEVVAPAAATNGGTNT-TINKLETIHEDAC-MANNPTNPDCYNGNTNNEQIAAVP 367
            :.:|          |.|.:|:..|:: .:::.|...:|.. :||.|:|.......|:........
  Rat   242 QQSQ----------ASAPSTSRTTSSEPVDQAEATSKDCSRLANGPSNGSSSRQRTSGSGFHREG 296

  Fly   368 QIPLSD-DGSNMNGNAA------RLARKRNYQEEEALPTVVVVPTPTPVGNNVQEAPPIREVTAP 425
            ..|..| ..|:.|||.|      |..|..:|            ..|...|....::|...|    
  Rat   297 STPEDDFPSSSGNGNKASNSSEERTGRGSSY------------INPLSAGYESVDSPTGSE---- 345

  Fly   426 RTLPPKKSKLRGITTRRNSQLEEDHQPVTTPVAVPMIVDNAVAGMASEEAAAAAAAVNNSNTGII 490
                       ...|..::..:..|.|..         :.||:|..:....:...          
  Rat   346 -----------NSLTHHSNDTDSSHDPQE---------EKAVSGKGNRTVGSRHV---------- 380

  Fly   491 PETGVQVGVPVEG 503
             :.|:...|.|:|
  Rat   381 -QNGLDSSVNVQG 392

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
fl(2)dNP_523732.2 Wtap 110..305 CDD:293703 107/194 (55%)
TBPIP <227..318 CDD:284512 48/90 (53%)
WtapNP_001107014.1 Wtap 68..222 CDD:407242 93/153 (61%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C166335975
Domainoid 1 1.000 194 1.000 Domainoid score I3083
eggNOG 1 0.900 - - E1_KOG2991
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 227 1.000 Inparanoid score I3395
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0006292
OrthoInspector 1 1.000 - - oto97358
orthoMCL 1 0.900 - - OOG6_105437
Panther 1 1.100 - - LDO PTHR15217
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X6014
SwiftOrtho 1 1.000 - -
TreeFam 1 0.960 - -
1211.750

Return to query results.
Submit another query.