DRSC/TRiP Functional Genomics Resources

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Protein Alignment stj and AT5G60710

DIOPT Version :10

Sequence 1:NP_001246303.1 Gene:stj / 36526 FlyBaseID:FBgn0261041 Length:1271 Species:Drosophila melanogaster
Sequence 2:NP_200879.1 Gene:AT5G60710 / 836192 AraportID:AT5G60710 Length:704 Species:Arabidopsis thaliana


Alignment Length:298 Identity:57/298 - (19%)
Similarity:100/298 - (33%) Gaps:98/298 - (32%)


- Green bases have known domain annotations that are detailed below.


  Fly   133 EPGDPVPPIPTPAPDMDKDI----GEPLIYVQPKVVVLEPRPE-------FHNTPVNF------- 179
            :|...|.||..|..|....|    ..|:.|..        ||:       |:..|..|       
plant   130 KPKSGVKPIGRPRDDAWMSIPPRRSSPIQYTS--------RPDCLRVSSIFNTEPAVFNDDEALE 186

  Fly   180 -----SVSSVHVP-------VNVFDRAPDVIKAIQWSENLDQIFRD-----NYKNDPTLSWQFFG 227
                 :.|.:..|       |..:....:|::::.        |:|     |.| .||.|    .
plant   187 HQDRSAESGLDKPGVTGTLEVKTYPEISEVVRSVS--------FKDFAVLINLK-APTSS----K 238

  Fly   228 SSTGFMRQFPASKWRKDVPVDLYDCRLRSWYMEAATSPKDIVILMDGSGSMLGQRLDIAKHVVNT 292
            ||:.     |:|..|                     :|.|:|.::|.||||.|.:|.:.|..:..
plant   239 SSSN-----PSSSSR---------------------APVDLVTVLDVSGSMAGTKLALLKRAMGF 277

  Fly   293 ILDTLGTNDFVNIFTFDKEVSPVVPCFEDTLIQANLGNIRELKEGIELFRPKSIANYTAALTKAF 357
            ::..||..|.:::.:|........|    ..:....|. :|..:.:.........|....|.|..
plant   278 VIQNLGPFDRLSVISFSSTARRNFP----LRLMTETGK-QEALQAVNSLVSNGGTNIAEGLKKGA 337

  Fly   358 ELLEETKLSSRGAQCNQAIMIIGDG-------APENNR 388
            .:|.:.:..:..:    :|:::.||       :|..:|
plant   338 RVLIDRRFKNPVS----SIVLLSDGQDTYTMTSPNGSR 371

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
stjNP_001246303.1 VWA_N 107..241 CDD:462464 29/142 (20%)
vWA_VGCC_like 253..439 CDD:238740 27/143 (19%)
dCache_1 <528..624 CDD:460673
PDC2_MCP_like 586..708 CDD:350337
VGCC_alpha2 870..>1084 CDD:462488
AT5G60710NP_200879.1 RING-H2_WAVH2 71..121 CDD:438476
vWA_C3HC4_type 251..419 CDD:238743 26/130 (20%)
Vwaint 600..671 CDD:464221
Blue background indicates that the domain is not in the aligned region.

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