DRSC/TRiP Functional Genomics Resources

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Protein Alignment stj and AT3G54780

DIOPT Version :10

Sequence 1:NP_001246303.1 Gene:stj / 36526 FlyBaseID:FBgn0261041 Length:1271 Species:Drosophila melanogaster
Sequence 2:NP_001326107.1 Gene:AT3G54780 / 824643 AraportID:AT3G54780 Length:682 Species:Arabidopsis thaliana


Alignment Length:423 Identity:86/423 - (20%)
Similarity:151/423 - (35%) Gaps:118/423 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly    39 LVHSWAD-KLGMELFHLGDFITRRKEVQ---------ESFKDAKVVS---------------RNG 78
            :|..|.. ||.:.| :|.:::.|..|.:         |:..||.::|               |..
plant    50 MVSKWKKMKLALSL-NLCNYLPRTLEEEPPSLALNSAETLSDAALLSPLNWPMTPTPSSYRRRLS 113

  Fly    79 ASIVDSMAKEIEMMMDLKVSAVRRIMDTAENTALSHQNDMADKMFSYYSAKEMLEPGDPVPP--- 140
            .|...|..:...:.::.........:.|||   .||       ||.::.....::.|:.|.|   
plant   114 RSSSKSSKQTCSICLNKMKEGCGHAIFTAE---CSH-------MFHFHCIASNVKHGNQVCPVCR 168

  Fly   141 -----IPTPAPDMD----------KDIGEPLIYVQP--KVVVLEPRPEFHNTPVNFSVSSVHVPV 188
                 ||...|.:|          .|....|....|  :..:.:..||    |..|.........
plant   169 AKWKEIPIQKPSLDLPYYPFDRCNNDAAISLFRCLPPSQRAITQGHPE----PATFDDDERLEEQ 229

  Fly   189 NVFDRAPDVIKAIQWSENLDQIFRDNYKNDPTLSWQFFGSSTGFMRQFPASKWRKDVPVDLYDCR 253
            .|||...:|:|    .||.|.:...:.|..|.:|            ..|.||..::..|.:    
plant   230 IVFDGETEVLK----KENRDYVRMMDMKVYPEVS------------AVPQSKSCENFDVLV---- 274

  Fly   254 LRSWYMEAAT---------SPKDIVILMDGSGSMLGQRLDIAKHVVNTILDTLGTNDFVNIFTFD 309
                :::|.|         :|.|:|.::|.||||.|.:|.:.|..:..::..||::|.:::..|.
plant   275 ----HLKAVTGDQISQYRRAPIDLVTVLDISGSMGGTKLALLKRAMGFVIQNLGSSDRLSVIAFS 335

  Fly   310 KEVSPVVPCFEDTLIQANLGNIRELKEGIELFRPKSI-----ANYTAALTKAFELLEETKLSSRG 369
            .....:.|          |..:.:....:.|....|:     .|....|.|..:::|: :|....
plant   336 STARRLFP----------LTRMSDAGRQLALQAVNSLVANGGTNIVDGLRKGAKVMED-RLERNS 389

  Fly   370 AQCNQAIMIIGDGAPENNREVFELHNWRDPPYK 402
            .   .:|:::.||     |:.:.. |..||.||
plant   390 V---ASIILLSDG-----RDTYTT-NHPDPSYK 413

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
stjNP_001246303.1 VWA_N 107..241 CDD:462464 33/153 (22%)
vWA_VGCC_like 253..439 CDD:238740 35/164 (21%)
dCache_1 <528..624 CDD:460673
PDC2_MCP_like 586..708 CDD:350337
VGCC_alpha2 870..>1084 CDD:462488
AT3G54780NP_001326107.1 RING-H2_WAVH2 121..173 CDD:438476 10/61 (16%)
vWFA 292..>403 CDD:469594 27/129 (21%)
Vwaint 584..657 CDD:464221
Blue background indicates that the domain is not in the aligned region.

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