DRSC/TRiP Functional Genomics Resources

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Protein Alignment stj and WAVH1

DIOPT Version :10

Sequence 1:NP_001246303.1 Gene:stj / 36526 FlyBaseID:FBgn0261041 Length:1271 Species:Drosophila melanogaster
Sequence 2:NP_179853.1 Gene:WAVH1 / 816799 AraportID:AT2G22680 Length:683 Species:Arabidopsis thaliana


Alignment Length:191 Identity:41/191 - (21%)
Similarity:73/191 - (38%) Gaps:62/191 - (32%)


- Green bases have known domain annotations that are detailed below.


  Fly   226 FGSSTGFMRQFPASKWRKDVPVDLYDCRLRSWYMEAATSPKDIVILMDGSGSMLGQRLDIAKHVV 290
            |.::.||.|:         |||||                   |.::|.||...|.:|::.|..:
plant   289 FPTARGFARR---------VPVDL-------------------VAVLDVSGRNSGGKLEMLKQTM 325

  Fly   291 NTILDTLGTNDFVNIFTF---DKEVSPVVPCFEDTLIQANLGNIRELKEGIELFR-PKSIA---- 347
            ..:|..|...|.::|..|   .|.:||        |.:......|..:..:::.. |.|::    
plant   326 RIVLSNLREMDRLSIIAFSSSSKRLSP--------LRRMTANGRRSARRIVDIITVPGSVSGVGI 382

  Fly   348 -------NYTAALTKAFELLEETKLSSRGAQCN--QAIMIIGDGAPENNREVFELHNWRDP 399
                   :...||.||.::|::.:      |.|  .|:.::.|   ....:|.:|.:.|.|
plant   383 DFSGEGMSVNDALKKAVKVLDDRR------QKNPFTAVFVLTD---RQAHQVAQLAHSRIP 434

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
stjNP_001246303.1 VWA_N 107..241 CDD:462464 4/14 (29%)
vWA_VGCC_like 253..439 CDD:238740 32/164 (20%)
dCache_1 <528..624 CDD:460673
PDC2_MCP_like 586..708 CDD:350337
VGCC_alpha2 870..>1084 CDD:462488
WAVH1NP_179853.1 RING_Ubox 124..180 CDD:473075
vWA_C3HC4_type 301..461 CDD:238743 35/170 (21%)
Blue background indicates that the domain is not in the aligned region.

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