DRSC/TRiP Functional Genomics Resources

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Protein Alignment stj and cacna2d2b

DIOPT Version :10

Sequence 1:NP_001246303.1 Gene:stj / 36526 FlyBaseID:FBgn0261041 Length:1271 Species:Drosophila melanogaster
Sequence 2:XP_009294385.1 Gene:cacna2d2b / 568759 ZFINID:ZDB-GENE-060503-99 Length:1090 Species:Danio rerio


Alignment Length:1338 Identity:343/1338 - (25%)
Similarity:570/1338 - (42%) Gaps:330/1338 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly     9 WWRLCLGLLSVLVCLA---PCVNLQPAENINYNLVHSWADKLGMELFHLGDFITRRKEVQ----E 66
            |...|| ||.::|.|.   ..||...... :|.::| ||.::..|:..:...|:..::::    |
Zfish     4 WAHACL-LLLLMVILGGSWTAVNALTFPQ-HYTIMH-WARRIEQEIDRVLQHISGAQQLKGIYLE 65

  Fly    67 SFKDAKVVSRNGASIVDSMAKEIEMMMDLKVSAVRRIMDTAENTALSH--QNDMADKMFSYYSAK 129
            ..|...:|..|...||:.:|.:||.::..|..|:.|:...||.....|  |:.:.::...||::|
Zfish    66 KKKHFSLVRNNPRDIVEKVATDIERLLAKKRKALERLASEAERLQKEHRWQDGIKEENIEYYNSK 130

  Fly   130 -EMLEPGDPVPPIPTPAPDMDKDIGEPLIYVQPKVVVLEPRPEFHNTPVNFSVSSVHVPVNVFDR 193
             ||...|:          |:|..:...|.:|..        |.|.| .||:|.::|.:|.:::..
Zfish   131 AEMDYDGE----------DIDSQMSLKLDFVYD--------PSFKN-QVNYSHTAVQIPTDIYKG 176

  Fly   194 APDVIKAIQWSENLDQIFRDNYKNDPTLSWQFFGSSTGFMRQFPASKWRKDVPVDLYDCRLRSWY 258
            ||.::..:.|::.|:::|.:|.::||:|.||.|||:||..|.:||:.||....:||||.|.|.||
Zfish   177 APVILNELNWTQALERVFIENSRDDPSLLWQAFGSATGVTRYYPAAPWRAPDKIDLYDVRRRPWY 241

  Fly   259 MEAATSPKDIVILMDGSGSMLGQRLDIAKHVVNTILDTLGTNDFVNIFTFDKEVSPVVPCFEDTL 323
            ::.|:||||:|||:|.|||:.|..|.:.|..|..:||||..:|:||:..|:::...||||| |.|
Zfish   242 IQGASSPKDMVILVDVSGSVSGLTLKLIKASVTEMLDTLSDDDYVNVARFNEKAEAVVPCF-DHL 305

  Fly   324 IQANLGNIRELKEGIELFRPKSIANYTAALTKAF-ELLEETKLSSRGAQCNQAIMIIGDGAPENN 387
            :|||:.|.:..||.::..:.|...:|.:....|| :||.:|.:..  |.||:.||:..||..:..
Zfish   306 VQANVRNKKIFKEAVQQMQAKGTTDYKSGFHFAFNQLLNKTNVPR--ANCNKIIMLFTDGGEDRA 368

  Fly   388 REVFELHNWRDPPYKPVRVFTYLIGKEVANWD--DIRWMACENQGYYVHLSDTAEVREMVLNYIP 450
            :::||.:||   |.|.|||||:.:|:.  |:|  .::|:||.|:|||..:.....:|.....|:.
Zfish   369 QDIFEQYNW---PNKTVRVFTFSVGQH--NYDVTPLQWIACSNKGYYFEIRSICAIRINTQEYLD 428

  Fly   451 VMARPLVL-GRHDHPVIWSQVYADIEDTKLSDYLWDINQCEYQKADVLEYWQVHDRMLEPSEMHR 514
            |:.||:|| ||....|.|:.||.|.....|                                   
Zfish   429 VLGRPMVLAGRIAKQVQWTNVYQDALGLGL----------------------------------- 458

  Fly   515 RKYRRMKETWNQPVDSNVYQFMTTVSMPIYDRRENALINLTTDINPAAKINLQVTRIANILGVAG 579
                                 :.|.:||::        |||  :|..::..|       ||||.|
Zfish   459 ---------------------VVTGTMPVF--------NLT--VNGDSQNQL-------ILGVMG 485

  Fly   580 TDVPINEIKKLLSPFTLGVNGYAFIVTNNGYVLFHPDFRPIFQGYILKPAYNSVDMIEVELLDDD 644
            .||.::|:|:|...:.||.|||.|.:..|||||.||:.:|..:..   |...::|.::.|:.|..
Zfish   486 VDVHLDELKRLTPQYKLGANGYIFAIDPNGYVLMHPNLQPREEDL---PEQVTLDFLDAEVEDSS 547

  Fly   645 RPARDFNPVLMTIRDSIINQSTGSKWMLVKNHFDEM--KRVARVKRQYYWTAIKKTPFTLVI--- 704
            :         ..||..:|:..:|.  |.:|.....|  :.:..|.|.|.||.|..|.::|.:   
Zfish   548 K---------QEIRRQMIDGRSGD--MTIKTLIKSMDERYIDDVTRMYTWTPINDTDYSLGLVLP 601

  Fly   705 SYPEQYGVSHMDIRADQEIHRISIKGTNLRSVF------SGKRWKIHPDW---LFCKHSNRTFKT 760
            .|.|.|      |:||  :..:.::...|:|:.      :|..:....|:   |....:|..|  
Zfish   602 PYSEHY------IQAD--LSDVMLQLQYLQSLLPNSFESAGHVFLAPRDYCRRLHISENNTQF-- 656

  Fly   761 PEIELLYFLERMSEPGWRWPGSRSAMPPEHAAAMFSNNSSTGRYPSINEKESYYCDRQLMQALVF 825
                |:.||..|.|           :.|                      ||..||:.|:..|:.
Zfish   657 ----LVDFLSLMVE-----------ISP----------------------ESEDCDQGLIHNLIL 684

  Fly   826 DARVTGWFSNNTSFNSKDDKGTSASSPIAVLMGLLPRNEFKQRFGVTVAFLATHSGLTRWHEFHS 890
            |:.:. |......:.:| |.||                     :|....|.:|:.|:||   .:.
Zfish   685 DSGIL-WQLATRVWQNK-DLGT---------------------YGFLALFASTNGGVTR---VYP 723

  Fly   891 NAAEESGVGETFSQNNTRAIDEIWYKRAVDQHFVREESFVYSVPFDAGESNSEILV--------- 946
            |.|.||.      ..:...::..:|:|::|     .:.:::..|  ...|..::|:         
Zfish   724 NMAAESW------DEDPEPLNSNFYRRSLD-----NKGYIFRAP--TRTSMDDLLISENGTVGIL 775

  Fly   947 --TASHAVFHNEGGKTAPAAVVGFQFQHSALYKLFHNITGNA-------------------CAV- 989
              ||....|   |.||...||||.:....|....|..:..|.                   |.| 
Zfish   776 VTTAVEVAF---GSKTMKPAVVGVKLDLEAWVDKFKILASNVSDSRQAAHKCGPSRSCEMDCEVN 837

  Fly   990 -DDKDCYILDNNGYVIIST-RVH--ETGRFFGEVNGAIMKRLLEENVYRQVTVYDYQAVCFESKN 1050
             ||..||::|:.|::::|. |.|  :.|.|||||:..:|..|...::|.:...:.||:.|..:.:
Zfish   838 SDDLLCYLIDDGGFLVMSNQRDHWKKVGLFFGEVDPYLMFALYNNSIYSRHQTFQYQSACEPTAS 902

  Fly  1051 DNNASS---MLLSPLFHLLRVGKWLLHTALWYIVQLLQWAPGVSSHY--ADMYGDSNDTEPPPPE 1110
            .:..::   ..:..:...|.:. |....|.|.|:|...:....||.:  ||::.:|.|::     
Zfish   903 SHTGAAHRGFYVPSIADFLSLA-WWTSAAAWSILQQFLYGVMYSSWFTTADVWAESADSK----- 961

  Fly  1111 PHPDHHARNGNGHGKKDDDHWLRYLTLHRTRLKPCDMKRDLYTLFNEKDNVVYNMTAHACERPFV 1175
                     |:.          ..:|::         .:..:|......||:.:  ...|.|.|.
Zfish   962 ---------GSS----------SCVTVY---------SQFYFTNTTNSFNVLQD--CGNCSRLFH 996

  Fly  1176 VLPIPFSNLILLVIDQL----CPRDGSVVLTVNPQ---PIDYHLSVNDSLACYKQAREFNRMRPH 1233
            ...|..:||:.:|.:.|    |..:..:.:....|   |.|...|     |.|::.       |.
Zfish   997 AKRIENTNLLFVVAETLPCSSCEIEKLLPVRTKSQEENPCDVLNS-----ARYRKG-------PD 1049

  Fly  1234 SCISRHANESGIKLCGKACSVYANLGLLLLCHILSRWL 1271
            .|.. :.:|.....||.|.|::..|..|||..:...:|
Zfish  1050 KCFD-YNSEENTSQCGSAHSLHCPLPALLLVQLFLIYL 1086

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
stjNP_001246303.1 VWA_N 107..241 CDD:462464 41/136 (30%)
vWA_VGCC_like 253..439 CDD:238740 76/188 (40%)
dCache_1 <528..624 CDD:460673 32/95 (34%)
PDC2_MCP_like 586..708 CDD:350337 37/126 (29%)
VGCC_alpha2 870..>1084 CDD:462488 58/251 (23%)
cacna2d2bXP_009294385.1 VWA_N 106..224 CDD:462464 41/136 (30%)
vWA_VGCC_like 236..416 CDD:238740 76/187 (41%)
PDC2_MCP_like 492..605 CDD:350337 37/126 (29%)
VGCC_alpha2 627..1064 CDD:462488 110/566 (19%)

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