DRSC/TRiP Functional Genomics Resources

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Protein Alignment stj and Cacna2d2

DIOPT Version :10

Sequence 1:NP_001246303.1 Gene:stj / 36526 FlyBaseID:FBgn0261041 Length:1271 Species:Drosophila melanogaster
Sequence 2:NP_783182.2 Gene:Cacna2d2 / 300992 RGDID:631360 Length:1157 Species:Rattus norvegicus


Alignment Length:1334 Identity:342/1334 - (25%)
Similarity:558/1334 - (41%) Gaps:326/1334 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly    16 LLSVLVCLAPCVNLQPAENINYNLVHS---WADKLGMELFHLGDFITRRKEVQESFKDAK----V 73
            ||...:.|.|.:....|...::...|:   ||.:|..|:..:.......::::|.:||.:    |
  Rat    46 LLLPPLLLLPLLTAPGASAYSFPQQHTMQHWARRLEQEIDGVMRIFGGVQQLREIYKDNRNLFDV 110

  Fly    74 VSRNGASIVDSMAKEIEMMMDLKVSAVRRIMDTAENTALSH--QNDMADKMFSYYSAKEMLEPGD 136
            .......:|:.:|.:||.::|.||.|::|:.|.|||...:|  |:::.::...||.||...|..|
  Rat   111 QENEPQKLVEKVAGDIESLLDRKVQALKRLADAAENFQKAHRWQDNIKEEDIMYYDAKADAELDD 175

  Fly   137 PVPPIPTPAPDMD---KDIGEPLIYVQPKVVVLEPRPEFHNTPVNFSVSSVHVPVNVFDRAPDVI 198
            |      .:.||:   |.....|.:::        .|.|.| .||:|.::|.:|.:::..:..::
  Rat   176 P------ESEDMERGSKTSALRLDFIE--------EPNFKN-KVNYSYTAVQIPTDIYKGSTVIL 225

  Fly   199 KAIQWSENLDQIFRDNYKNDPTLSWQFFGSSTGFMRQFPASKWRKDVPVDLYDCRLRSWYMEAAT 263
            ..:.|:|.|:.:|.:|.:.||||.||.|||:||..|.:||:.||....:||||.|.|.||::.|:
  Rat   226 NELNWTEALENVFIENRRQDPTLLWQVFGSATGVTRYYPATPWRAPKKIDLYDVRRRPWYIQGAS 290

  Fly   264 SPKDIVILMDGSGSMLGQRLDIAKHVVNTILDTLGTNDFVNIFTFDKEVSPVVPCFEDTLIQANL 328
            ||||:||::|.|||:.|..|.:.|..|..:||||..:|:||:.:|:::..| |.||.. |:|||:
  Rat   291 SPKDMVIIVDVSGSVSGLTLKLMKTSVCEMLDTLSDDDYVNVASFNEKAQP-VSCFTH-LVQANV 353

  Fly   329 GNIRELKEGIELFRPKSIANYTAALTKAFELLEETKLSSRGAQCNQAIMIIGDGAPENNREVFEL 393
            .|.:..||.::....|....|.|....||:.|:.:.::.  |.||:.||:..||..:..::|||.
  Rat   354 RNKKVFKEAVQGMVAKGTTGYKAGFEYAFDQLQNSNITR--ANCNKMIMMFTDGGEDRVQDVFEK 416

  Fly   394 HNWRDPPYKPVRVFTYLIGKEVANWD--DIRWMACENQGYYVHLSDTAEVREMVLNYIPVMARPL 456
            :||   |.:.|||||:.:|:.  |:|  .::||||.|:|||..:.....:|.....|:.|:.||:
  Rat   417 YNW---PNRTVRVFTFSVGQH--NYDVTPLQWMACTNKGYYFEIPSIGAIRINTQEYLDVLGRPM 476

  Fly   457 VL-GRHDHPVIWSQVYADIEDTKLSDYLWDINQCEYQKADVLEYWQVHDRMLEPSEMHRRKYRRM 520
            || |:....|.|:.||.|.....|                                         
  Rat   477 VLAGKDAKQVQWTNVYEDALGLGL----------------------------------------- 500

  Fly   521 KETWNQPVDSNVYQFMTTVSMPIYDRRENALINLTTDINPAAKINLQVTRIANILGVAGTDVPIN 585
                           :.|.::|::        |||.| .|..|.| |:     ||||.|.||.:|
  Rat   501 ---------------VVTGTLPVF--------NLTQD-GPGEKKN-QL-----ILGVMGIDVALN 535

  Fly   586 EIKKLLSPFTLGVNGYAFIVTNNGYVLFHPDFRPIFQGYILKPAYNSVDMIEVELLDDDRPARDF 650
            :||:|...:|||.|||.|.:..|||||.||:.:|....: .:|.  ::|.::.||.|:::.    
  Rat   536 DIKRLTPNYTLGANGYVFAIDLNGYVLLHPNLKPQTTNF-REPV--TLDFLDAELEDENKE---- 593

  Fly   651 NPVLMTIRDSIINQSTGSKWM--LVKNHFDEMKRVARVKRQYYWTAIKKTPFTLVISYPEQYGVS 713
                 .||.|:|:...|.|.:  |||: .|| :.:..|.|.|.|..|:.|.::|.:..| .|...
  Rat   594 -----EIRRSMIDGDKGHKQIRTLVKS-LDE-RYIDEVIRNYTWVPIRSTNYSLGLVLP-PYSTY 650

  Fly   714 HMDIRADQEIHRISIKGTNLRS--------------VFSGKRWKIHPDWLFCKHSNRTFKTPEIE 764
            ::......:|.::.:..:.|:.              ||...|       .:||..|.:....|. 
  Rat   651 YLQANLSDQILQVKLPISKLKDFEFLLPSSFESEGHVFIAPR-------EYCKDLNASDNNTEF- 707

  Fly   765 LLYFLERMSEPGWRWPGSRSAMPPEHAAAMFSNNSSTGRYPSINEKESYYCDRQLMQALVFDARV 829
            |..|:|.|.:           :.|                      :|..|:..|:..|:.|..:
  Rat   708 LKNFIELMEK-----------VTP----------------------DSKQCNNFLLHNLILDTGI 739

  Fly   830 TGWFSNNTSFNSKDDKGTSASSPIAVLMGLLPRNEFKQRFGVTVAFLATHSGLTRWHEFHSNAAE 894
            |                       ..|:..:.|::....:.:...|.||..|:||  .|.:.|||
  Rat   740 T-----------------------QQLVERVWRDQDLNTYSLLAVFAATDGGITR--VFPNKAAE 779

  Fly   895 ESGVGETFSQNNTRAIDEIWYKRAVDQHFVREESFVYSVPFDAG------ESNSEILVTASHAVF 953
            :       ...|....:..:|:|::|     ...:::..|....      ..|..:.|..|.||.
  Rat   780 D-------WTENPEPFNASFYRRSLD-----NRGYIFKPPHQDSLLRPLELENDTVGVLVSTAVE 832

  Fly   954 HNEGGKTAPAAVVGFQFQHSALYKLFHNITGNA-------------------CAVDDKD--CYIL 997
            .:.|.:|...||||.:....|..:.|..:..|.                   |.|:::|  |.::
  Rat   833 LSLGRRTLRPAVVGVKLDLEAWAEKFKVLASNRTHQDQPQKQCGPSSHCEMDCEVNNEDLLCVLI 897

  Fly   998 DNNGYVIISTRVH---ETGRFFGEVNGAIMKRLLEENVYRQVTVYDYQAVCFESKNDNNASS--- 1056
            |:.|::::|.:.|   :.||||.||:..:|..|...:.|.:...|||||.|......|..::   
  Rat   898 DDGGFLVLSNQNHQWDQVGRFFSEVDANLMLALYNNSFYTRKESYDYQAACAPQPPGNLGAAPRG 962

  Fly  1057 MLLSPLFHLLRVGKWLLHTALWYIVQLLQWAPGVSSHYADMYGDSNDTEPPPPEPHPDHHARNGN 1121
            :.:..:...|.:. |....|.|.:.|.|.        |..:|......:|...|..|:       
  Rat   963 VFVPTIADFLNLA-WWTSAAAWSLFQQLL--------YGLIYHSWFQADPAEAEGSPE------- 1011

  Fly  1122 GHGKKDDDHWLRYLTLHRTRLKPCDMKRDLYTLFNEKDNVVYN--MTAHACERPFVVLPIPFSNL 1184
                              ||...|.||:..|  :....|..||  :....|.|.|....:..:||
  Rat  1012 ------------------TRESSCVMKQTQY--YFGSVNASYNAIIDCGNCSRLFHAQRLTNTNL 1056

  Fly  1185 ILLVIDQ----------------LCPRDGSVVLTVNPQPIDYHLSVNDSLACYKQAREFNRMRPH 1233
            :.:|.::                .||.||       |:            .|....|...|..||
  Rat  1057 LFVVAEKPLCSQCEVGRLLQKETHCPADG-------PE------------QCELVQRPRYRRGPH 1102

  Fly  1234 SCISRHANESGIKLCGKACSVYANLGLLLLCHIL 1267
            .|...:|.|. ...||:..|...:||:|:...:|
  Rat  1103 ICFDYNATED-TSDCGRGASFPPSLGVLVSLQLL 1135

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
stjNP_001246303.1 VWA_N 107..241 CDD:462464 43/138 (31%)
vWA_VGCC_like 253..439 CDD:238740 73/187 (39%)
dCache_1 <528..624 CDD:460673 36/95 (38%)
PDC2_MCP_like 586..708 CDD:350337 41/123 (33%)
VGCC_alpha2 870..>1084 CDD:462488 58/246 (24%)
Cacna2d2NP_783182.2 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..37
VWA_N 144..268 CDD:462464 43/138 (31%)
vWA_VGCC_like 280..459 CDD:238740 73/187 (39%)
MIDAS-like motif 300..304 2/3 (67%)
HK_sensor 536..645 CDD:365792 41/122 (34%)
VGCC_alpha2 672..1117 CDD:462488 112/578 (19%)
Blue background indicates that the domain is not in the aligned region.

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