DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment stj and unc-36

DIOPT Version :9

Sequence 1:NP_001246303.1 Gene:stj / 36526 FlyBaseID:FBgn0261041 Length:1271 Species:Drosophila melanogaster
Sequence 2:NP_001040851.1 Gene:unc-36 / 176155 WormBaseID:WBGene00006772 Length:1249 Species:Caenorhabditis elegans


Alignment Length:1324 Identity:313/1324 - (23%)
Similarity:510/1324 - (38%) Gaps:416/1324 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly    65 QESFKDAKVVSRNGASIVDSMAKEIEMMMDLKVSAVRRIMDTAENTALSHQNDMADKMF-SYYSA 128
            :|.|.....:.::...|.|.:....:.....|:|...|   :..|.  |..||...|.| .:.||
 Worm    59 EEQFDPRAELKKSKHRIEDYLKVRSQFAYKAKISLEAR---SVRND--STVNDPQSKSFIRFMSA 118

  Fly   129 KEMLEPGDPVPPIPTPAPDMDKDIGEPLIYVQPKVVVLEPRPEFHNTPVNFSVSSVHVPVNVFDR 193
            |:    |:....|..     ...:|:.|...:.|...|.....|:..|.:...|:||:|..::||
 Worm   119 KQ----GNDGTTIYE-----SNHLGKRLKVNETKSFNLTQNANFYTLPTSSVSSAVHIPTPLYDR 174

  Fly   194 APDVIKAIQWSENLDQIFRDNYKNDPTLSWQFFGSSTGFMRQFPASKW---RKDVPVDLYDCRLR 255
            ..|:::.|.||: :|.::|.|.:....|::|.|.|..|:||.:||:.|   .:|..:||:|||..
 Worm   175 NEDLLRKIDWSD-IDAVYRTNREETKDLAFQLFCSEAGYMRYYPAASWFWDNQDEHLDLFDCRNT 238

  Fly   256 SWYMEAATSPKDIVILMDGSGSMLGQRLDIAKHVVNTILDTLGTNDFVNIFTFDKEVSPVVPC-F 319
            .||:.:||:.|:::|::|.||||||||.::||.....||:||..||:.||.||.|....:..| .
 Worm   239 EWYINSATNSKNVLIMLDMSGSMLGQRYEVAKQTTEAILETLSHNDYFNIMTFSKNTFLLDGCNG 303

  Fly   320 EDTLIQANLGNIRELKEGIELFRPKSIANYTAALTKAFELL------------EETKLSS----- 367
            .:.|:||.:.|.:.|:..::.::.:..|.|..||..||.:|            ||..:.|     
 Worm   304 TNGLLQATMRNKKALRRKMDTYQSEGKAEYEKALPLAFSVLLDLKGSYALYTKEEMSMMSANATN 368

  Fly   368 -------------------------------RGAQCNQAIMIIGDGAPENNREVFELHNWRDPPY 401
                                           ||| |...||:|.||||...:::|:::|    ..
 Worm   369 EYQFHLELPEHVLAATKQYIDSINNGGGDNNRGA-CENVIMLITDGAPNAYKKIFDMYN----AD 428

  Fly   402 KPVRVFTYLIGKEVANWDDIRWMACENQGYYVHLSDTAEVREMVLNYIPVMARPLVLGRHDHPVI 466
            |.|||||:|:|.|..:::::|.|||.|:||.||:::.|:|.|.:.:||..|:|  |:|||     
 Worm   429 KKVRVFTFLVGDEAIDFNEVREMACNNRGYMVHVANMADVDEKIHHYIRRMSR--VVGRH----- 486

  Fly   467 WSQVYADIEDTKLSDYLWDINQCEYQKADVLEYWQ--VHDRMLEP-------------------S 510
                                    |:::..|.:|.  ..:|:..|                   :
 Worm   487 ------------------------YKESGQLSWWTGVYRERLYLPRPEIFAEPVPITNQSFAVMN 527

  Fly   511 EM-HRRKYRRMKETWNQPVDSNVYQFMTTVSMPIYDRRENALINLTTDINPAAKINLQVTRIANI 574
            :| .|||.|..|.      ::....|:||||.|:       ::|.|                  .
 Worm   528 KMASRRKIRLQKS------EARSRMFVTTVSYPV-------IVNET------------------F 561

  Fly   575 LGVAGTDVPINEIKKLLSPFTLGVNGYAFIVTNNGYVLFHPDFRPI--FQGYILKPAYNSVDMIE 637
            :|||..::|:.|:.:...|..:|...|.|::..||:|:.||..|||  |..| .|..||::|::|
 Worm   562 MGVAAVNIPLTEVAQKSHPANIGSKSYFFMLDQNGFVMTHPQLRPIDPFTKY-HKQNYNNMDLLE 625

  Fly   638 VEL-----------------------------LDDDRPARDFNPVLMTIRDSIINQSTGSKWMLV 673
            :|:                             :||.|.|         :|..||:........|.
 Worm   626 LEVGQNQNVRSSQKSQAVSDLVCESGANYAECVDDLRKA---------VRKMIIDCDNSDVQQLD 681

  Fly   674 KNHFDE-MKRVARVKRQYYWTAIKKTPFTL-----------VISYPEQY--GVSHMDIRADQEIH 724
            ..:..| :.||......||...|....|.|           |:...::|  |...||...|    
 Worm   682 VLYATELLDRVYPQTNTYYAECINHANFVLGLAVAKGDDYRVVKKQKKYDFGRVKMDWMGD---- 742

  Fly   725 RISIKGTNLRSVFSGKRWKIHPDWLFCKHSNRTFKTPEIELLYFLERMSEPGWRWPGSRSAMPPE 789
                           |||::||.|.:|                ||.          .:.:.|..|
 Worm   743 ---------------KRWRLHPHWRYC----------------FLN----------DTDTHMSKE 766

  Fly   790 HAAAMFSNN-SSTGRYPSINEKESYYCDRQLMQALVFDARVT-----GWFSNNTSFNSKDDKGTS 848
            .|..:::.. |.:|:.|.:.|..     |.|::.|:.|...|     .|   :|.||        
 Worm   767 EAFEIYAQQMSDSGKAPLLCEYR-----RNLVEKLLLDMEATSNLIDSW---DTQFN-------- 815

  Fly   849 ASSPIAVLMGLLPRNEFKQRFGVTVAFLATHSGLTRW----------------------HEFHSN 891
                            |.:...:.:||.||.||:.|:                      |.....
 Worm   816 ----------------FMKNNLIHLAFFATPSGMIRYYNLTLQDYDYIDPYWSIFEHIGHLLSIE 864

  Fly   892 AAEESGVGETFSQNNTRAIDEIWYKRAVDQHFVREESFVYSVPFDAGESNSEI------------ 944
            .|:|| .....:..|.::.|:.:|:|||..    :::.::.|     .:||:|            
 Worm   865 HAQES-YNHFITDLNRKSTDDRYYRRAVRM----KDTIMFDV-----SNNSKIWYKSETQLTGYG 919

  Fly   945 -------LVTASHAVFHNEGGKTAPAAVVGFQFQHSALYKLFHNITGNACAVDD--KDCYILDNN 1000
                   |..|..|::.::    |...|.||:|.:.   .:...:..:.|...|  |.|.:||.:
 Worm   920 LNENLTMLGQAFKAIYLDK----AVLGVSGFEFAYD---HVVDTMAEHGCPASDDRKWCVLLDEH 977

  Fly  1001 GYVIIST------------RVHETGRFFGEVN---GAIMKRLLEENVYRQVTVYDYQAVCFESKN 1050
            .||..|.            :.....::||.:|   ...|..|:|...|.::|..|.||||...|.
 Worm   978 AYVFFSNQNDISYEDYLVGKGKHISQYFGGLNRIAQRAMALLVENKFYTKLTYTDNQAVCKAEKV 1042

  Fly  1051 DNNASSML--LSPLFH-LLRVGKWLLHTALWYIVQLLQWAPGV--SSHYADMYGDSNDTEPPPPE 1110
            ...:.:.|  ..|:|. |::...:::..|.......|.|.|.:  :..|...:.:..|..|.|.:
 Worm  1043 VTTSGNRLRPFYPIFRFLMQTFNFMVRLASQISGGFLIWLPNIQFTEAYTASFHEGTDVYPCPKQ 1107

  Fly  1111 -----PHPDHHARNGNGH---GKKDDDHWLRYLTLHRTRLKPCDMKRDLYTLFNEKDNVVYNMTA 1167
                 .:.|...|.|..|   |.:.:              :||.|        |.|.:|      
 Worm  1108 SSFYFSNKDGKNRPGTTHLVNGNRSE--------------RPCKM--------NAKCSV------ 1144

  Fly  1168 HACERPFVVLPIPFSNLILLVIDQ 1191
             ..|..||    ..:||:::.|.|
 Worm  1145 -KMEASFV----DGTNLVMVWITQ 1163

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
stjNP_001246303.1 VWA_N 107..241 CDD:285584 39/134 (29%)
vWA_VGCC_like 253..439 CDD:238740 76/234 (32%)
Cache_1 524..619 CDD:280839 22/94 (23%)
unc-36NP_001040851.1 VWA_N 95..221 CDD:285584 40/140 (29%)
vWA_VGCC_like 236..466 CDD:238740 76/234 (32%)
Cache_1 548..606 CDD:280839 21/82 (26%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C160166457
Domainoid 1 1.000 69 1.000 Domainoid score I6290
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 255 1.000 Inparanoid score I1950
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D110668at33208
OrthoFinder 1 1.000 - - FOG0000496
OrthoInspector 1 1.000 - - otm14582
orthoMCL 1 0.900 - - OOG6_103783
Panther 1 1.100 - - O PTHR10166
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R5109
SonicParanoid 1 1.000 - - X365
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
1211.930

Return to query results.
Submit another query.