DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment stj and tag-180

DIOPT Version :9

Sequence 1:NP_001246303.1 Gene:stj / 36526 FlyBaseID:FBgn0261041 Length:1271 Species:Drosophila melanogaster
Sequence 2:NP_001022363.1 Gene:tag-180 / 174730 WormBaseID:WBGene00007041 Length:1067 Species:Caenorhabditis elegans


Alignment Length:1308 Identity:259/1308 - (19%)
Similarity:462/1308 - (35%) Gaps:429/1308 - (32%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MAWSRLLAWWRLCLGLLSV-LVCLAPCVNLQPAENINYNLVHSWADKLGMELFHLGDFIT--RRK 62
            |.:..::.:| |.|..|.| .:..||....|.:.||                  |.||.|  |..
 Worm     1 MGYVHVVLFW-LSLSQLPVDTIEEAPASIAQFSANI------------------LRDFETQSRFS 46

  Fly    63 EVQESFK----DAKVVSRNGASIVDSMAKEIEMMMDLKVSAVRRIMDTAENTAL--------SHQ 115
            .|||.|:    |.|....:.|..:....:.::.::..:|.|::::..:||.:|.        ::.
 Worm    47 LVQEEFEKLKPDIKSKKEDAAEKLRVATEHLDRLVTNRVDALKKLASSAEASAAVFDEYDDQAYA 111

  Fly   116 NDMADKMFSYYSAKEMLEPGDPVPPIPTPAPDMDKDIGEPLIYVQPKVVVLEPRPEFHNTPVNFS 180
            ...|||....| .|:|.|            .||.        :|...|.        ||     |
 Worm   112 VPQADKRCEAY-MKKMNE------------SDMH--------FVSNMVE--------HN-----S 142

  Fly   181 VSSVHVPVNVFDRAPDVIKAIQW--SENLDQIFRDNYKNDPTLSWQFFGSSTGFMRQFPASKWRK 243
            .|.:|:.|..:...|.|::...|  :::|::...||.:..|.:..|:.|:.:|..|.:|...|:.
 Worm   143 KSGIHITVESYQCDPRVMRDFDWTGTKHLEKTMSDNKEKAPEMGHQYIGTYSGLTRMYPRRHWKV 207

  Fly   244 D---VPVDLYDCRLRSWYMEAATSPKDIVILMDGSGSMLGQRLDIAKHVVNTILDTLGTNDFVNI 305
            :   :.:||:|.|.|.|::.|.:.|||||.|:|.|||:.|..:.:.|..:..||.||..||:...
 Worm   208 EPTPITIDLFDPRFRPWFVNAESVPKDIVFLLDYSGSVKGPTMHLIKITMMYILSTLSPNDYFFG 272

  Fly   306 FTFDKEVSPVVPCFEDTLIQANLGNIRELKEGIELFRPKSIANYTAALTKAFELL------EETK 364
            ..|:...:|::.|...|.:.|...|.:...|.:.:...|..|::...|..:.::|      .::.
 Worm   273 VYFNNHFNPIISCANRTFMPATTSNKKVFFEELGMLEEKDQAHFATPLKFSLDVLRGNLDSNQSL 337

  Fly   365 LSSRGAQCNQAIMIIGDGAPENNREV----FELHNWRDPPYKPVRVFTYLIGKEVANWDDIRWMA 425
            .:...::.::.::|..||..|...::    |:..|     .:.:|:|.:.:|...:.....::||
 Worm   338 FADYRSEGHKLLIIFTDGVDEWPHQILDEEFQTRN-----SELIRIFGFSMGYGTSLLPLQQYMA 397

  Fly   426 CENQGYYVHLSDTAEVREMVLNYIPVMARPLVLGRHDHPVIWSQVYADIEDTKLSDYLWDINQCE 490
            |::.|.|..:....:|:........|:               |||..|                 
 Worm   398 CKSHGGYSEIDSIMDVKPQSRTIQNVL---------------SQVRGD----------------- 430

  Fly   491 YQKADVLEYWQVHDRMLEPSEMHRRKYRRMKETWNQ---------PVDSNVYQFMTTVSMPIYDR 546
                                |:......:.:.:|.|         |:        .|:|:||   
 Worm   431 --------------------ELKGTNAEKREPSWTQLYMETQGTGPI--------VTLSLPI--- 464

  Fly   547 RENALINLTTDINPAAKINLQVTRIANILGVAGTDVPINEIKKLLSPFTLGVNGYAFIVTNNGYV 611
                   ||::        .::.|...:.||...|:.|.|..|.|.  |.....|.:||.|||.:
 Worm   465 -------LTSE--------QRIWRDQKLAGVVAIDISIKEFTKHLP--TSSEQMYGYIVDNNGML 512

  Fly   612 LFHPDFR----------------------------PIFQGYILKPAYNSVDMIE-VELLD----- 642
            ::||..:                            .:..|:..:..|..|.:|: :..||     
 Worm   513 IYHPQLQIPKTEVHCVRRSACYDAQQVKQKAGSGLRVHYGFSDERVYRLVGLIDSIPTLDMYDLE 577

  Fly   643 -DDRPARDFNPVLMTIRDSIINQSTGSKWMLVKNHFDEMKRVARVKRQYYWTAIKKTPFTLVISY 706
             |....||....:.|                 |..::|  .:....::|:.:.||.:||||||  
 Worm   578 GDSTAIRDLRRRITT-----------------KTCYEE--AIKDNSKEYHCSHIKDSPFTLVI-- 621

  Fly   707 PEQYGVSHMDIRA---DQEIHRISIKGTNLRSVFSGKR----WKIHPDWLFCKHSNRTFKTPEIE 764
                 |:::.::.   |..:..:.:....|.:.|..:|    ||:                    
 Worm   622 -----VNNIQLKTVYYDDSVQELGLTDNKLVTFFYPRRDVCQWKL-------------------- 661

  Fly   765 LLYFLERMSEPGWRWPGSRSAMPPEHAAAMFSNNSSTGRYPSINEKESYYC---DRQLMQALVFD 826
                                   .|:||     :.....:..|:|||  .|   |.:|.:|  |.
 Worm   662 -----------------------DEYAA-----HDRFRVWSDISEKE--ICAQDDMRLPRA--FT 694

  Fly   827 ARVTGWFSNNTSFNSKDDKGTSASSPIAVLMGLLPRNEFKQRFGVTVAFLATHSGLTRWHEFHSN 891
            ..:..|   ..|:...|.:.|:.      |:...|.|.....:  ..:|:.|.|.||.::     
 Worm   695 KGLGSW---TQSWPKSDIEHTTC------LLAQYPENASVPHY--VNSFVHTRSKLTAFY----- 743

  Fly   892 AAEESGVGETFSQNNTRAIDEIWYKRAVDQHFVREESFVYSVPFDAGESNSE-ILVTASHAVFHN 955
                    .|.|.::         .:||::.|..|.....:..|......|| :|:..:.|.:.|
 Worm   744 --------PTCSSHD---------MKAVNKKFDEEIKLTDNNDFVQFSMRSESLLIYRTIADYDN 791

  Fly   956 EGGKTAPAAVVGFQFQHSALYKLFHNIT-----GNACAVDDKDCYILDNNGYVIISTRVHETGRF 1015
            .     ..||||.|::.:...:.|.|.|     ...|.  .::|.|:..||:||.|: .|.....
 Worm   792 N-----RLAVVGTQWKENFFDQYFDNFTRQNPDWKICR--KQECSIITRNGHVIASS-AHRAPAH 848

  Fly  1016 FGEVNGAIMKRLLEENVYRQVTVYDYQAVCFE------SKNDNNASSML---LSPLFHLLRVGKW 1071
            ..:.:..:.:.|::.|:....:..:.|:.|..      |.....:||:|   ::.:|.|.:...|
 Worm   849 LAKFDPQLFESLVKVNLVSTNSWTEVQSECKAKRVAPWSSAAPGSSSILRYFVTSIFKLAKTSFW 913

  Fly  1072 --LLHTALWYIVQLLQWAPGVSSHYADMYGDSNDTEPPPPEPHPDHHARNGNGHGKKDDDHWLRY 1134
              ||.:||..:                      |.:|          :..||             
 Worm   914 RNLLESALTLV----------------------DAQP----------SMTGN------------- 933

  Fly  1135 LTLHRTRLKP---CDMKRDLYTLFNEKDNVVYNMTAH-----------ACERPFVVLPIPFSNLI 1185
             |....::||   |.||     .|:      |.||.:           .|.|...:.|:|.:.|.
 Worm   934 -TCTFQKIKPFERCFMK-----FFH------YRMTLNITKQLQLTGMSTCSRYAKLYPVPHTTLS 986

  Fly  1186 LLVIDQLC 1193
            |::.|:.|
 Worm   987 LIIADRAC 994

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
stjNP_001246303.1 VWA_N 107..241 CDD:285584 32/143 (22%)
vWA_VGCC_like 253..439 CDD:238740 47/195 (24%)
Cache_1 524..619 CDD:280839 26/131 (20%)
tag-180NP_001022363.1 VWA_N <106..201 CDD:369855 28/128 (22%)
vWA_VGCC_like 220..411 CDD:238740 47/195 (24%)
dCache_1 <430..>517 CDD:376917 27/151 (18%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D110668at33208
OrthoFinder 1 1.000 - - FOG0000496
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR10166
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
44.020

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