DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment stj and CG42818

DIOPT Version :9

Sequence 1:NP_001246303.1 Gene:stj / 36526 FlyBaseID:FBgn0261041 Length:1271 Species:Drosophila melanogaster
Sequence 2:NP_001188821.1 Gene:CG42818 / 10178877 FlyBaseID:FBgn0262000 Length:1085 Species:Drosophila melanogaster


Alignment Length:876 Identity:150/876 - (17%)
Similarity:270/876 - (30%) Gaps:294/876 - (33%)


- Green bases have known domain annotations that are detailed below.


  Fly   232 FMRQFPASKWRKDVPVDLYDCRLRSWYMEAATSPKDIVILMDGSGSMLGQRLDIAKHVVNTILDT 296
            |:::||....:.|:....|..:|...:    .|||                .|          .|
  Fly    44 FLQEFPTQSSKGDLDDLKYPTQLEGRH----DSPK----------------YD----------KT 78

  Fly   297 LGTNDFVNIFTFDKEVSPVVPCFEDTLIQANLGNIR-ELKEGIELFRPKSIANY--TAALTKAF- 357
            ..|....|..|..:|:       |:.:::.||.:.: |.:|. ...:||::.::  ..|:...| 
  Fly    79 FHTEIHANNETDSQEL-------ENIILEKNLQDSKTEFQEN-RASQPKNMHSFQIPEAIESHFN 135

  Fly   358 --ELLEETKLSSRGAQCNQAIMIIGDGAPENNREVFELHNWRDPPYKPVRVFTYLIGKEVANWDD 420
              ||..|..|.....|..::........|||.||:                    ..|.:..|  
  Fly   136 NKELQNENDLHKGLKQQYRSGSEQDKSGPENVREI--------------------ASKLILQW-- 178

  Fly   421 IRWMACENQ-----GYYVHLSDTAEVREMVLNY-IPVMARPLVLGRHDHPVIWSQVYADIEDTKL 479
                 .|||     .:...::|..:|.:..||. |.:..|.:::                    |
  Fly   179 -----AENQRSLLDSFVKAITDVLKVHDSKLNMKINISPRDIMI--------------------L 218

  Fly   480 SDYLWDINQCEYQKAD---------VLEYWQVHDRMLEPSEMHRRKYRRMKETWNQPVD--SNVY 533
            .|.|..:.:...|..:         ||..|      :|..:.....:.:..:..||.||  :|||
  Fly   219 KDMLKQLLESIMQLREGSTSTRARIVLNKW------IETQKSLIDSFSQAIQNTNQNVDNIANVY 277

  Fly   534 QFMTTVSMPI------------YDRRENALINLTTDI----------------NPAAKINL-QVT 569
            :.|..::..:            :...|::....||.|                :|....|: :|.
  Fly   278 EVMENLNKNLRELVILLSDKESFPTTESSSSQQTTSIYATTTFYLTSSTFGSTHPIVDENINRVN 342

  Fly   570 RIANIL-GVAGTDVPINEIKKLLSPFTLGVNGYAFIVTNNGYVLFHPDFRPIFQGYI---LKPAY 630
            .:.|:: |:....|.::|..|..|       ..::..|.:.|:      :|....|:   :..::
  Fly   343 IMGNLIKGLRNIMVQMDETNKTSS-------STSYTTTESTYI------QPSTSTYLNAEVTTSH 394

  Fly   631 NSVDMIEV-ELLDDDRPARDFNPVLMTIRDSIINQSTGSKWMLVKNHFDEM-----KRVAR---- 685
            .:....|| .::.|:...:|...::..|.| :|:|..|      |:.|...     |..:|    
  Fly   395 PTTSTYEVTNIITDESKIKDMFNLIKGIED-LISQYNG------KHKFTSTTSLTGKSNSREPTM 452

  Fly   686 --------VKRQYYWTAIKKTPFT-----LVISYPEQYGVSHMDIRA-DQEIHRISIKGTNLRSV 736
                    :....:.|...||..|     ...|.|.....|:.::.. ||:.|:..:....::  
  Fly   453 TTYSSAGGITSHSFTTTSPKTVTTSSSHSTTESSPSHPTTSNYEVTVFDQDSHKFKVMKNLIK-- 515

  Fly   737 FSGKRWKIHPDWLFCKHSNRTFKTPEIELLYFLERMSEPGWRWPGSRSAMPPEHAAAMFSNNSST 801
                                       ||...:|..|:            .....:..:|...|.
  Fly   516 ---------------------------ELKGLIEHFSD------------TKNITSTTYSTGDSK 541

  Fly   802 GRYPSINEKESYYCDRQLMQALVFDARVTGWFSNNTSFNSKDDKGTSASSPIAVLMGLLPRNEFK 866
            ...|:....:|  .||...|.:.|....|    :.|:..|......|..|..:.|      |...
  Fly   542 SFQPTATTPDS--TDRSSSQPITFPESTT----STTNLQSTITNHLSTESTSSQL------NTTL 594

  Fly   867 QRFGVTVAFLATHSGLTRWHEFHSNAAEESG-------------VGETFSQNNTRAIDEIWYKRA 918
            ...|.|...|.|.:     |:|.....::..             |.....:||.::..::     
  Fly   595 SITGTTTPNLTTST-----HDFKDQINDDDSKSLKHLIKILSDLVYSLNDKNNIKSTSQL----- 649

  Fly   919 VDQHFVREESFVYSVPFDAGESNSEILVTASHAVFHNEGGKTAPAAVVGFQFQHSALYKLFHNIT 983
                 ..|.:|           ||.|.:|.|..|..:....|...|:      ||..|.....||
  Fly   650 -----TTESTF-----------NSSINITNSTTVASSTFSTTESMAI------HSTPYLSTREIT 692

  Fly   984 GNACAVDDKDCY--ILDNNGYVIISTRVHET 1012
              ....:|.:..  |:.||. ..::|.:|.:
  Fly   693 --VFQFNDVENINPIISNNS-TTVTTNIHSS 720

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
stjNP_001246303.1 VWA_N 107..241 CDD:285584 3/8 (38%)
vWA_VGCC_like 253..439 CDD:238740 35/196 (18%)
Cache_1 524..619 CDD:280839 23/126 (18%)
CG42818NP_001188821.1 PHA03255 642..>763 CDD:165513 22/109 (20%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG2353
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
10.900

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