DRSC/TRiP Functional Genomics Resources

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Protein Alignment Cpr50Cb and Cpr56F

DIOPT Version :10

Sequence 1:NP_610901.1 Gene:Cpr50Cb / 36525 FlyBaseID:FBgn0033869 Length:178 Species:Drosophila melanogaster
Sequence 2:NP_611470.1 Gene:Cpr56F / 37299 FlyBaseID:FBgn0034499 Length:217 Species:Drosophila melanogaster


Alignment Length:216 Identity:70/216 - (32%)
Similarity:92/216 - (42%) Gaps:56/216 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 KSFVLLSLSLAAISAYAYAQIAPGSNAYLPPTK------NGY-----DYSEPKTPFKP-----GP 53
            |:|..::| |..::|:.:|:.....|.||||.:      |.|     .|..|.:.:.|     |.
  Fly     2 KAFTSIAL-LVCLAAWTHAEPPVPQNQYLPPNQSPQAPSNNYLPPTQGYQSPSSNYLPPQRAGGN 65

  Fly    54 PGRPAAPGPRPPAPP----GTPR---------NIPGQPG--------------DDHVHVPGMPYD 91
            .|.|:.....|.|||    |.|.         |..|..|              |:..:.|. .|:
  Fly    66 GGAPSNSYGAPIAPPQGQYGAPALTGAIFKGGNGNGNGGYGGGNGNGNGYGQRDEEQYGPA-KYE 129

  Fly    92 FEYAVQDPETANDYAHKASSDGDVVTGEYRVQMPDGRTQIVRYTADWKTGYHADVSYEGEATYPQ 156
            |:|.|||.|:.||:.|..|.|||:..|.|.|.:||||.|||.|.|| :.||...:.||       
  Fly   130 FKYDVQDYESGNDFGHMESRDGDLAVGRYYVLLPDGRKQIVEYEAD-QNGYRPTIRYE------- 186

  Fly   157 GPQPGARGGGGGGAG-GAGGY 176
              |.|...|.|.|.| ..|||
  Fly   187 --QVGNGNGNGNGNGRNGGGY 205

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cpr50CbNP_610901.1 Chitin_bind_4 90..142 CDD:459790 27/51 (53%)
Cpr56FNP_611470.1 Chitin_bind_4 128..179 CDD:459790 27/51 (53%)

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