DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Cpr50Cb and Cpr5C

DIOPT Version :10

Sequence 1:NP_610901.1 Gene:Cpr50Cb / 36525 FlyBaseID:FBgn0033869 Length:178 Species:Drosophila melanogaster
Sequence 2:NP_572266.1 Gene:Cpr5C / 31510 FlyBaseID:FBgn0029811 Length:145 Species:Drosophila melanogaster


Alignment Length:151 Identity:46/151 - (30%)
Similarity:66/151 - (43%) Gaps:31/151 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly     2 MSFKSFVLLSLSLAAISAYAYAQIAPGSNAYLPPTKNGYDYSEPKTPFKPGPPGRPAAPGPRPPA 66
            |:||...||:| :||.|    |.:.|....|         ::.|...:        ||     ||
  Fly     1 MAFKFVALLAL-IAAAS----AGVLPAGQLY---------HAAPVATY--------AA-----PA 38

  Fly    67 PPGTPRNIPGQP---GDDHVHVPGMPYDFEYAVQDPETANDYAHKASSDGDVVTGEYRVQMPDGR 128
            |....:.: .||   ..|..:.|...|.:.|.|||..:.:..:.....|||||.|||.:...||.
  Fly    39 PAAVLKTV-AQPVLAKADEEYDPHPQYKYAYDVQDAISGDSKSQVEERDGDVVRGEYSLVDSDGF 102

  Fly   129 TQIVRYTADWKTGYHADVSYE 149
            .:.|:||||...|::|.|:.|
  Fly   103 KRTVQYTADPINGFNAVVNRE 123

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cpr50CbNP_610901.1 Chitin_bind_4 90..142 CDD:459790 20/51 (39%)
Cpr5CNP_572266.1 Chitin_bind_4 64..116 CDD:459790 20/51 (39%)

Return to query results.
Submit another query.