DRSC/TRiP Functional Genomics Resources

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Protein Alignment tei and cadm1a

DIOPT Version :10

Sequence 1:NP_523731.2 Gene:tei / 36521 FlyBaseID:FBgn0000633 Length:822 Species:Drosophila melanogaster
Sequence 2:NP_001107023.2 Gene:cadm1a / 569931 ZFINID:ZDB-GENE-080505-2 Length:446 Species:Danio rerio


Alignment Length:418 Identity:104/418 - (24%)
Similarity:158/418 - (37%) Gaps:125/418 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly   232 PVPPNPYEAEEMSVVYAEQHSEIKLMCEVDLDIATSMWYKNG-----QVVHAMDRTARVTDYRFI 291
            ||......::.:|||..|..:   :.|.|          ||.     |:::...:|....|.|.:
Zfish    36 PVQSQNLISDNVSVVEGETAT---ISCRV----------KNNDDSVIQLLNPNRQTIYFKDVRPL 87

  Fly   292 KEANGAL----------TITNVMLEDDGKWQCEAENTRRYTENARP--VKLVVLDRPKPPYLLID 344
            |:|...|          :::||.|.|:|::.|:.     ||:..:.  ..:.||..|..|  :|:
Zfish    88 KDARFQLVNFSDNELRVSLSNVSLSDEGRYVCQL-----YTDPPQEAYADITVLIPPGNP--IIE 145

  Fly   345 SRRLDASNLFVPVKENSELNLACVSEGGNPRPTLTWEVLLSPGVDRHAQKVSAEVLELEEIKGEK 409
            ||. |.      |.|.:|..:.|.|.|..|..|:.|                        :||:|
Zfish   146 SRE-DI------VSEGNETEITCTSMGSKPAATIRW------------------------MKGDK 179

  Fly   410 LDKDGYKINSGAKSEARLP-------------AVYRAHHNARILCVMEHPTLKIRQNASLLLDVQ 461
             :..|       ||:..|.             .|.|......::|:::||.:|..| |...|:||
Zfish   180 -ELQG-------KSKVELTYDKMFTVTSWLRLTVTREDDGVPVVCIVDHPAVKDFQ-AQKYLEVQ 235

  Fly   462 YTPSFAISRTPGFGYPLREGIEVSLKCDVDSNP-PSTPRWQKDDGDTP---VPQTGDGFLNFTSI 522
            |.|...|......| |:|||..:.|.|.....| |....|.:.|.|.|   |....|.|:.  ::
Zfish   236 YKPEVQIVVDFPSG-PIREGENLELTCLAKGKPEPQQVNWVRVDDDVPSHAVITGSDLFIE--NL 297

  Fly   523 RREHSGWYKC-TSRHLNFQYSSIGYYLSVR-------------FDSVDVTSEPDD--QDV--SVA 569
            .:.::|.|:| .|..|...|..  |.|.||             ..::..|:.|.|  ||.  |..
Zfish   298 NKSYNGTYRCVASNPLGEAYDD--YILFVRDALTTTPIPTTTTTTTISATTSPPDVIQDAAPSTE 360

  Fly   570 AASHNPNKGQLEVQ-------LGGAVTL 590
            ||:|:...| .|.|       :||.|.:
Zfish   361 AAAHDSQAG-AETQRSMDHALIGGVVAV 387

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
teiNP_523731.2 IG_like 244..332 CDD:214653 23/104 (22%)
Ig strand B 254..258 CDD:409353 0/3 (0%)
Ig strand C 267..271 CDD:409353 0/3 (0%)
Ig strand E 296..300 CDD:409353 1/13 (8%)
Ig strand F 310..315 CDD:409353 1/4 (25%)
Ig strand G 326..329 CDD:409353 0/4 (0%)
Ig 359..452 CDD:472250 21/105 (20%)
Ig_3 478..533 CDD:464046 17/59 (29%)
IG_like 578..660 CDD:214653 6/20 (30%)
cadm1aNP_001107023.2 IgV_1_Necl-2 42..135 CDD:409465 23/110 (21%)
FR1 42..60 CDD:409465 4/20 (20%)
Ig strand A 42..44 CDD:409465 0/1 (0%)
Ig strand A' 45..51 CDD:409465 2/5 (40%)
Ig strand B 53..61 CDD:409465 2/10 (20%)
CDR1 61..66 CDD:409465 3/14 (21%)
FR2 67..74 CDD:409465 1/6 (17%)
Ig strand C 67..73 CDD:409465 1/5 (20%)
CDR2 75..86 CDD:409465 2/10 (20%)
Ig strand C' 77..81 CDD:409465 1/3 (33%)
Ig strand C' 83..86 CDD:409465 1/2 (50%)
FR3 87..122 CDD:409465 9/39 (23%)
Ig strand D 91..98 CDD:409465 1/6 (17%)
Ig strand E 101..107 CDD:409465 0/5 (0%)
Ig strand F 114..122 CDD:409465 2/12 (17%)
CDR3 123..126 CDD:409465 1/2 (50%)
Ig strand G 126..135 CDD:409465 0/8 (0%)
FR4 128..135 CDD:409465 0/6 (0%)
Ig 136..234 CDD:472250 32/139 (23%)
Ig strand B 157..161 CDD:409353 0/3 (0%)
Ig strand C 171..175 CDD:409353 2/27 (7%)
Ig strand E 199..203 CDD:409353 0/3 (0%)
Ig strand F 213..218 CDD:409353 1/4 (25%)
Ig strand G 227..230 CDD:409353 2/3 (67%)
Ig_3 237..311 CDD:464046 21/76 (28%)
4.1m 399..417 CDD:128590
Blue background indicates that the domain is not in the aligned region.

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