DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG17716 and alcamb

DIOPT Version :9

Sequence 1:NP_001286391.1 Gene:CG17716 / 36521 FlyBaseID:FBgn0000633 Length:822 Species:Drosophila melanogaster
Sequence 2:NP_997799.3 Gene:alcamb / 323919 ZFINID:ZDB-GENE-030131-1768 Length:562 Species:Danio rerio


Alignment Length:615 Identity:134/615 - (21%)
Similarity:226/615 - (36%) Gaps:158/615 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly   243 MSVVYAEQHSEIKLMCE----VDLDIATSMWY--KNGQVV--HAMDRTARVTDYRF-----IKEA 294
            :..|..:....:::.|.    .|:.:....|.  |:|.::  |.....:..||..:     ||:.
Zfish    22 LETVTGKYGDTVEIPCNSGLVSDVGVTFVKWKSDKDGSILVKHTGQNASSPTDGNYKNRVSIKKD 86

  Fly   295 NGALTITNVMLEDDGKWQC---EAENTRRYTENARPVKLVVLDRPKPPYLLIDSRRLDASNLFVP 356
            .| |.||.|.|.|...:.|   .|::...|     ||:||:...|..|.:         :||...
Zfish    87 FG-LIITQVSLADQKTFTCMVVAADDILEY-----PVQLVIYKTPLQPQI---------ANLTTA 136

  Fly   357 VKENSELNLA-CVSEGGNPRPTLTWEVLLSPGV-DRHAQKVSAEVLELEEIKGEKLDK-DGYKIN 418
            ::......|| |.:||.||...:||....:|.: |..|.|::.:|         .:|| .|.   
Zfish   137 MEIGKLTTLAQCHTEGANPAANITWFKNKTPLIADGTAIKITNDV---------AVDKATGL--- 189

  Fly   419 SGAKSEARLPAVYRAHHNARILCVMEHPTLKIRQNASLLLDVQYTPSFAISRTPGFGYPLREGIE 483
            |...|:....|| :...|::..|.::|.......::.|:..|.| ||..||.......|::||..
Zfish   190 SATTSKLEYTAV-KDDINSKFTCQVQHIKSANMDSSPLVFTVNY-PSETISFHVLPDGPVKEGDN 252

  Fly   484 VSLKCDVDSNPPSTPRWQKDDGDTPVPQTGDGFLNFTSIRREHSGWYKCT---------SRHLNF 539
            |:|||..|.|||.:.......|:....:..:.|: .:::.|:::|.|||:         |:::..
Zfish   253 VTLKCTADGNPPPSRYNFYIKGEKKTVEKSNIFI-LSNVTRQNTGEYKCSLVDNEILTASKNITV 316

  Fly   540 QY-----SSIGYYLSVRFDSVDVTSEPDDQDVSVAAASHNPNKGQLEVQLGGAVTLQCPQGSLGC 599
            :|     |:.|.......||.:.|                     |:::..|.....|.:|    
Zfish   317 EYLDVILSTTGEVFKKLGDSFETT---------------------LDIKASGKTETFCKKG---- 356

  Fly   600 WSHLDPISARLRGLGYGSSQPTGQFSLKDVMYQDAGMYKCVGQSPTNKKKLEVLQSVTVSVKGAP 664
                          |.....|....|||   |.|:|:|:||    .....|:..|:..::|.|.|
Zfish   357 --------------GEKMVGPPKFASLK---YTDSGVYECV----VTMLGLKKTQTFDLNVHGQP 400

  Fly   665 TVMALNATPVAYPGSPLHLNVEFCANPPAHAARWLHGDRVFTPGNQYGTTVLAYAVKDLPTPFCK 729
            .:.:|  |.....|:...|:.| ....|....:|:..          ||.|....          
Zfish   401 LIKSL--TKKRGDGTNKILSCE-AEGSPKPTVQWITN----------GTDVKFQE---------- 442

  Fly   730 EARLTYVSMHERVPRTFYFIVSTPGGVAEA--IFN-VNFTKRHRQLSNSIDD------DEEEELN 785
                   |.|.....|:|..||....|..:  |.| :....|...:|:.::|      |:.|:.:
Zfish   443 -------SEHVNGKITYYITVSPKANVTVSCTISNDLGSDTRSIDVSSLVEDVTMDKQDQSEDYS 500

  Fly   786 RPEQIHFPVFNGSPADGRGWWAVVLALLLV 815
            ....:...:..|          ::||.||:
Zfish   501 DQTALAVGIVVG----------LMLAALLI 520

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG17716NP_001286391.1 IG_like 244..332 CDD:214653 24/103 (23%)
Ig 254..323 CDD:143165 20/84 (24%)
Ig 359..452 CDD:299845 24/95 (25%)
Ig_3 477..536 CDD:290638 19/67 (28%)
IG_like 479..550 CDD:214653 21/84 (25%)
IG_like 578..660 CDD:214653 17/81 (21%)
alcambNP_997799.3 Ig 23..121 CDD:299845 24/103 (23%)
IG_like 23..121 CDD:214653 24/103 (23%)
C2-set_2 128..215 CDD:285423 26/108 (24%)
Ig_3 241..300 CDD:290638 16/59 (27%)
IG_like 243..317 CDD:214653 19/74 (26%)
IG_like 403..482 CDD:214653 20/108 (19%)
Ig 411..473 CDD:299845 17/89 (19%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 82 1.000 Inparanoid score I5177
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
21.960

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