DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG17716 and rst

DIOPT Version :9

Sequence 1:NP_001286391.1 Gene:CG17716 / 36521 FlyBaseID:FBgn0000633 Length:822 Species:Drosophila melanogaster
Sequence 2:NP_001284835.1 Gene:rst / 31290 FlyBaseID:FBgn0003285 Length:764 Species:Drosophila melanogaster


Alignment Length:542 Identity:115/542 - (21%)
Similarity:192/542 - (35%) Gaps:124/542 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly   230 LRPVPPNPYEAEEMSVVYAEQ----HSEIKLMCEVDLDIATSMWYKN------GQVVHAMDRTAR 284
            :|..|...|:.:..::...:|    .:.:.|.|.|.....|..|.|:      .:.:...:|.|.
  Fly    17 VRSSPYTSYQNQRFAMEPQDQTAVVGARVTLPCRVINKQGTLQWTKDDFGLGTSRDLSGFERYAM 81

  Fly   285 V-TDYRFIKEANGALTITNVMLEDDGKWQC------EAENTRRYTENARPVKLVVLDRPKPPYLL 342
            | :|    :|.:.:|.|..|||:||.::||      |.:...|.|.    ..|.||..|:.|.: 
  Fly    82 VGSD----EEGDYSLDIYPVMLDDDARYQCQVSPGPEGQPAIRSTF----AGLTVLVPPEAPKI- 137

  Fly   343 IDSRRLDASNLFVPVKENSELNLACVSEGGNPRPTLTW-----EVLLSPGVDRHAQKVSAEVLEL 402
                   .....:...|:.::.:.|||.||.|...:||     .||        ...:...|:.|
  Fly   138 -------TQGDVIYATEDRKVEIECVSVGGKPAAEITWIDGLGNVL--------TDNIEYTVIPL 187

  Fly   403 EEIKGEKLDKDGYKINSGAKSEARLPAVYRAHHNARILCVMEHPTLKIRQNASLLLDVQYTPSFA 467
            .:.:           ...|||..|| ...:.|||....|..::...:..::|.:.::|:|.|...
  Fly   188 PDQR-----------RFTAKSVLRL-TPKKEHHNTNFSCQAQNTADRTYRSAKIRVEVKYAPKVK 240

  Fly   468 IS---RTPG-----------------FGYPLREGIEVSLKCDVDSNPPSTPRWQKDDGDTPV--- 509
            ::   ..||                 .|..:.|..:|.|:|..|:| ||..|::....|.|:   
  Fly   241 VNVMGSLPGGAGGSVGGAGGGSVHMSTGSRIVEHSQVRLECRADAN-PSDVRYRWFINDEPIIGG 304

  Fly   510 PQTGDGFLNFTSIRREHSGWYKCTSRHLNFQYSSIGYYLSVRFDSVDVTSEPDDQDVSVAAASHN 574
            .:|.....|.|  |:.|....||..:                 :||..:.:.:..|:|. |.|..
  Fly   305 QKTEMVIRNVT--RKFHDAIVKCEVQ-----------------NSVGKSEDSETLDISY-APSFR 349

  Fly   575 PNKGQLEVQLGGAVTLQC-----PQGSLGCWSH-LDPISARLRGLGYGSSQPTGQFSLKDVMYQD 633
            .....:|..:|..|:|.|     ||..:....| .|.:......|.:..|..|            
  Fly   350 QRPQSMEADVGSVVSLTCEVDSNPQPEIVWIQHPSDRVVGTSTNLTFSVSNET------------ 402

  Fly   634 AGMYKCVGQSPTNKKKLEVLQSVTVSVKGAPTVMALNATPVAYPGSPLHLNVEFCANPPAHAARW 698
            ||.|.|....|   ...|:.....|.:||:|.: ....|.....|....:.....:.|.|....|
  Fly   403 AGRYYCKANVP---GYAEISADAYVYLKGSPAI-GSQRTQYGLVGDTARIECFASSVPRARHVSW 463

  Fly   699 LHGDRVFTPGNQYGTTVLAYAV 720
            ....:..:..:.:..::|..||
  Fly   464 TFNGQEISSESGHDYSILVDAV 485

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG17716NP_001286391.1 IG_like 244..332 CDD:214653 25/104 (24%)
Ig 254..323 CDD:143165 22/81 (27%)
Ig 359..452 CDD:299845 22/97 (23%)
Ig_3 477..536 CDD:290638 18/61 (30%)
IG_like 479..550 CDD:214653 18/73 (25%)
IG_like 578..660 CDD:214653 19/87 (22%)
rstNP_001284835.1 IG_like 34..130 CDD:214653 26/103 (25%)
Ig 42..114 CDD:299845 20/75 (27%)
C2-set_2 135..225 CDD:285423 23/117 (20%)
Ig_3 265..329 CDD:290638 19/83 (23%)
I-set 346..420 CDD:254352 19/88 (22%)
Ig 360..425 CDD:299845 17/79 (22%)
Ig5_KIRREL3-like 428..524 CDD:143235 10/59 (17%)
IG_like 435..524 CDD:214653 8/51 (16%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR11640
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
22.010

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