DRSC/TRiP Functional Genomics Resources

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Protein Alignment tei and Chl1

DIOPT Version :10

Sequence 1:NP_523731.2 Gene:tei / 36521 FlyBaseID:FBgn0000633 Length:822 Species:Drosophila melanogaster
Sequence 2:XP_006505530.1 Gene:Chl1 / 12661 MGIID:1098266 Length:1225 Species:Mus musculus


Alignment Length:54 Identity:15/54 - (27%)
Similarity:27/54 - (50%) Gaps:5/54 - (9%)


- Green bases have known domain annotations that are detailed below.


  Fly   153 ERKGWIKYL-FIPRPGVTLRQHKFYRELFPKIMKDIEAIENNWRTGNHNLQRIN 205
            ||...:.|: .:||....:|:.|   |:.|.:..||. :.:.|:|.:...:.||
Mouse    90 ERFKKLDYIHIVPRKPTKMRKLK---EIKPVVHCDIN-VPSRWQTQSRTSRYIN 139

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
teiNP_523731.2 IG_like 244..332 CDD:214653
Ig strand B 254..258 CDD:409353
Ig strand C 267..271 CDD:409353
Ig strand E 296..300 CDD:409353
Ig strand F 310..315 CDD:409353
Ig strand G 326..329 CDD:409353
Ig 359..452 CDD:472250
Ig_3 478..533 CDD:464046
IG_like 578..660 CDD:214653
Chl1XP_006505530.1 Ig 35..126 CDD:472250 11/39 (28%)
Ig strand B 53..57 CDD:409396
Ig strand C 66..70 CDD:409396
Ig strand E 90..94 CDD:409396 2/3 (67%)
Ig strand F 106..111 CDD:409396 1/4 (25%)
Ig strand G 120..123 CDD:409396 1/2 (50%)
IgI_2_L1-CAM_like 135..225 CDD:409432 2/5 (40%)
Ig strand A 135..138 CDD:409432 0/2 (0%)
Ig strand A' 140..144 CDD:409432 15/54 (28%)
Ig strand B 147..155 CDD:409432
Ig strand C 162..168 CDD:409432
Ig strand C' 171..174 CDD:409432
Ig strand D 180..184 CDD:409432
Ig strand E 186..190 CDD:409432
Ig strand F 201..209 CDD:409432
Ig strand G 212..225 CDD:409432
Ig 262..344 CDD:472250
Ig strand B 274..278 CDD:409394
Ig strand C 287..291 CDD:409394
Ig strand E 309..313 CDD:409394
Ig strand F 323..328 CDD:409394
Ig strand G 336..339 CDD:409394
Ig4_L1-NrCAM_like 348..435 CDD:409367
Ig strand B 364..368 CDD:409367
Ig strand C 377..381 CDD:409367
Ig strand E 400..404 CDD:409367
Ig strand F 414..419 CDD:409367
Ig strand G 427..430 CDD:409367
Ig 448..525 CDD:472250
Ig strand B 457..461 CDD:409390
Ig strand C 470..474 CDD:409390
Ig strand E 493..497 CDD:409390
Ig strand F 507..512 CDD:409390
Ig strand G 520..523 CDD:409390
IG_like 548..624 CDD:214653
Ig strand B 548..552 CDD:409440
Ig strand C 565..569 CDD:409440
Ig strand E 588..594 CDD:409440
FN3 <591..>868 CDD:442628
Ig strand F 604..609 CDD:409440
Ig strand G 617..620 CDD:409440
FN3 628..717 CDD:238020
FN3 833..927 CDD:238020
FN3 932..1027 CDD:238020
Bravo_FIGEY 1121..1206 CDD:464016
Blue background indicates that the domain is not in the aligned region.

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