DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG13334 and c-NAD-MDH2

DIOPT Version :10

Sequence 1:NP_610888.2 Gene:CG13334 / 36510 FlyBaseID:FBgn0033856 Length:361 Species:Drosophila melanogaster
Sequence 2:NP_199147.1 Gene:c-NAD-MDH2 / 834351 AraportID:AT5G43330 Length:332 Species:Arabidopsis thaliana


Alignment Length:332 Identity:79/332 - (23%)
Similarity:137/332 - (41%) Gaps:43/332 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly    50 KISVVG-AGQVGTAISAML---LLRNLTKNLVI--LDINYEL-----AKAEALDFQHASAFLSDA 103
            ::.|.| |||:|.|:..|:   ::....:.:::  |||.:..     .|.|.:|    :||....
plant     7 RVLVTGAAGQIGYALVPMIARGIMLGADQPVILHMLDIPFAAEALNGVKMELVD----AAFPLLK 67

  Fly   104 RVVPCGDSTNSKDSDVVIITAGARPSGKDRSRLAAMQKTVEILKKAVPKLVE-LSPNATFIIISN 167
            .||...|:..:.....|.:..|..|..:...|...|.|.|.|.|.....|.: .:||...::::|
plant    68 GVVATTDAVEACTGVNVAVMVGGFPRKEGMERKDVMSKNVSIYKSQASALEKHAAPNCKVLVVAN 132

  Fly   168 PADVMTYAVQRIT-NLPKHR--CFTTGCHLDTVRFRNLIANRLRLPPSQVHGYVI-GEHGASAVP 228
            ||:.....::... ::|:..  |.|   .||..|....::.||.:|.|.|...:| |.|.::..|
plant   133 PANTNALILKEFAPSIPEKNITCLT---RLDHNRALGQVSERLSVPVSDVKNVIIWGNHSSTQYP 194

  Fly   229 ------VWSSVSIAGIRLNDVVKNLACGDDPENW--AKINKQVTTGGLAVAKTKGYTN--WAIAL 283
                  |.:||....:|  ::|||       :.|  .:....|...|.|:.|.:..::  .|.:.
plant   195 DVNHATVKTSVGEKPVR--ELVKN-------DEWLNGEFISTVQQRGAAIIKARKLSSALSAASS 250

  Fly   284 TCADIVQAMSG-GKGKIACVGTDMKGLNGIQDNVVLSLPCLVTAGGISHVFELPLTDVEQSKLLA 347
            .|..|...:.| .:|....:|....|...:...::.|.|.....|..:.|..||:.|..:.|:..
plant   251 ACDHIRDWVVGTPEGTFVSMGVYSDGSYNVPAGLIYSFPVTCRNGEWTIVQGLPIDDASRKKMDL 315

  Fly   348 SANILLE 354
            :|..|.|
plant   316 TAEELKE 322

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG13334NP_610888.2 LDH_1 46..358 CDD:133429 79/332 (24%)
c-NAD-MDH2NP_199147.1 PLN00135 24..332 CDD:177744 72/315 (23%)

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